| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1180 |
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| Symbol | |
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| ID | 5733073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1354081 |
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| End bp | 1355538 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641278320 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001543956 |
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| Protein GI | 159897709 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATC GCAGTTTCCT GTTGTTACTG CTGATCAGCA TGCTGATCGC CGCCTGTGGT
GGTAGCACAA CGCCTACGAC CGCACCAACC GCTGACACTG CTGCTCAAGC CACCACGGCT
CCAGCCGCAA CCGAAGCACC AGCCGCGACC GAAGCACCAG CCGCAACCGA AGCACCAGCC
GCAACCAAAA CTACAGATAG CACTGGCAGC GTCCCAGCCG TCAACCCTAA CTATGCCGAA
TTAGTCCGCG CCGAAGCTGG CGAATTCAAA GGCACTAAAG TCAGCATTTT CGGTTTGTGG
GTTGAAGCTG AAGACACCGC CTTCAATCAA ACCTTGGCTG CTTTCGAAGC CCGCACTGGC
ATCGATGTTC AGTACGAAGG CTCGAAAGAT TTCGAAACTT TGATTCCTGT TCGCGCCGAA
GGCGGTAACG CCCCTGACAT CGCTGGTTTC TCACAACCAG GCTTGATGGC AACCTTGGCT
CGCAAGAACA AGTTGGTCGA TATCTCAAGC TTCATCAAAC CAGAAGACTT GCAAAAAGAT
TACATCCAAT CATGGATCGA TCTTGGCTCA GTTGATAACA CCCTCTACGG TGTCTTCTTC
CGCGCCAGCA CCAAGAGCAT CGTCTGGTAT CCAGTTCCAG CCTTCGAAGA AGCTGGCTAC
ACCATTCCAG AAACCTGGGA TGAATTGACC GCTTTGAGCG ACAAGATGGT TGCTGATGGC
AACACTCCAT GGTGTATCGG CTTGGAACAC GGCAACGTGA CCGGTTGGGT GGCTACCGAC
TGGATGGAAG ACATCATGTT GCGCACCGCT GGCGCTGAAA CCTACGACAA GTGGGTCAGC
CACGAAATCC CATTCACCGA CCCAAGCGTC AAGAACGCCG CTGAAGTCAT GGGTAAAATC
TGGTTCAACG AAACCTACGT TGCCGGTGGC CGCGAAGGTA TCTTGACCAC CACCGTGGCC
GATACCCAAA CCCCAATGTT CAACGCCGAC AAACCAGGCT GCTGGTTGCA CCGCCAAGCT
GGCTGGATTC CATCATTCTT CCCAGAAGGC AAGAAAGCTG GTACCGACAG CAACTTCTTC
TACTTGCCAC CAATTGATCC AGCTCAAGGC AAGCCTGTGT TGGGTGGTGG CGACGTGTTC
GCAATGTTCA ACGACCGCCC TGAAGTTCGC GCCGTGTTGC AATACTTGGC TAGCCCAGAA
TCAGCCAAAG GCTGGGTCGA AGCTGGTGGC TTTATCTCAC CAAACAAGAG TGTAGATTTG
GCTTGGTATG GTAACGACAT CGACCGCCGC CAAGCTGAAA TCATCAAGGA AGCTACCGTA
TTCCGCTTTG ATGCTTCTGA CTTGATGCCA GCCGAAGTTG GCGTAGGTAC CTTCTGGAAA
GGTATGGTCG ATTACGTGAA CAATACCGAA ATCGACACCG TGTTGCAAAC CATCGAAGAA
AGCTGGCCAC AAAACTAA
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| Protein sequence | MKHRSFLLLL LISMLIAACG GSTTPTTAPT ADTAAQATTA PAATEAPAAT EAPAATEAPA
ATKTTDSTGS VPAVNPNYAE LVRAEAGEFK GTKVSIFGLW VEAEDTAFNQ TLAAFEARTG
IDVQYEGSKD FETLIPVRAE GGNAPDIAGF SQPGLMATLA RKNKLVDISS FIKPEDLQKD
YIQSWIDLGS VDNTLYGVFF RASTKSIVWY PVPAFEEAGY TIPETWDELT ALSDKMVADG
NTPWCIGLEH GNVTGWVATD WMEDIMLRTA GAETYDKWVS HEIPFTDPSV KNAAEVMGKI
WFNETYVAGG REGILTTTVA DTQTPMFNAD KPGCWLHRQA GWIPSFFPEG KKAGTDSNFF
YLPPIDPAQG KPVLGGGDVF AMFNDRPEVR AVLQYLASPE SAKGWVEAGG FISPNKSVDL
AWYGNDIDRR QAEIIKEATV FRFDASDLMP AEVGVGTFWK GMVDYVNNTE IDTVLQTIEE
SWPQN
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