| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1169 |
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| Symbol | |
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| ID | 5733062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1341571 |
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| End bp | 1342509 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641278309 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001543945 |
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| Protein GI | 159897698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000063461 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTT GGCAACTGCT GATGGCCCGC CTCGACCTCT CGCCAACCTT GGCCCAAACC
CTGATGGTAC GCGGCGCGAT TTGGATCAAC AGCGTGCGGG TTACTGATCC GTTGGCTGAG
GCTCCGCCAG AAGGCGAATT GGTGGTGCAT ACACCGCCCG CTGGTTTATA TGCCAACCCC
GTGGTCACTC CTGCCGACAT CTTATTTGAA GATGAATGGA TTTTGGTGCT CAATAAGCCA
GCCGCTTGGT ATAGCGTGGC CACGCCGTGG GATACCTTTG GGCATCTCGA AGGCGCGTTG
CAACGCTTTT TTCTTGAGCG CGATGGCGAA GCTGTGCCGT TTCACCTGGT CCATCGACTG
GATCATGGTA CCTCAGGCGC GTTGATCGTC TCCAAAAATC CTAGCCTCAA TAGTCGTTTT
CAGCGCATGT TCAACGAGGG TCGGGTGCAG AAAACCTACT TGGCGCTATG CAGTGGCCTA
CCCGATTGGA CGAAATTAGA AGTTGTGACA GGCCATTCAC GCGGCGAGTT TGGGCTGTGG
TCGGTTTACC CCGCAGCAAT GATCGATCAA TTGTATGGGC CTAAGGATCG GCGGGTGCGG
CGGGCGCATA CCAGTTTTAC AGTGCAGGCA GTTGGCAACG CAGCGGCTTT ACTGGCGGCT
CGCTTGCACA CTGGCCGCAC CCATCAAATT CGTTTGCATG CGAAACATAT TGGACATCCC
TTGGTGGGCG ATCAACGCTA TGGTGGCGTA ACTCAGTTTG GCAATTTGAG CATTCCTGAT
CAATTATTAC ACGCTGCTTG GCTGCAATTT CCGCATCCGC GCTATGGCTC GATGCTTGAG
TTAATCGCGC CAGTGCCAAG TCTATGGCAC GTGGTTGGAG CAGCAGTCGG AATTGATCTG
CAAACGGGAT TGCTCGAAGA AGGACATTCA GCGCCATGA
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| Protein sequence | MPLWQLLMAR LDLSPTLAQT LMVRGAIWIN SVRVTDPLAE APPEGELVVH TPPAGLYANP
VVTPADILFE DEWILVLNKP AAWYSVATPW DTFGHLEGAL QRFFLERDGE AVPFHLVHRL
DHGTSGALIV SKNPSLNSRF QRMFNEGRVQ KTYLALCSGL PDWTKLEVVT GHSRGEFGLW
SVYPAAMIDQ LYGPKDRRVR RAHTSFTVQA VGNAAALLAA RLHTGRTHQI RLHAKHIGHP
LVGDQRYGGV TQFGNLSIPD QLLHAAWLQF PHPRYGSMLE LIAPVPSLWH VVGAAVGIDL
QTGLLEEGHS AP
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