Gene Haur_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1168 
Symbol 
ID5733061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1340810 
End bp1341574 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID641278308 
Producthypothetical protein 
Protein accessionYP_001543944 
Protein GI159897697 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00022573 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTGT TGATGTTATG CGGGTTTGCC TTGTTGGCGG GGTTTATTGA TGCGGTGGCT 
GGTGGTGGTG GCTTAATTCA ACTGCCACCC TTGTTGATTA CCCAAAAAGA TATTGCTCCA
GCCTTTATCC TGGGAACCAA TAAATTTGCC GCAGTCACGG GCACGGCCAC GGCAGCGGTC
AGTTACAATC GGCGGGTCAA AGTCAATTGG CAAATTGTCG TGCCAGGTAT GTTTAGTGCG
GCAATTTGTT CGTGGCTGGG GGCGCGAGCT GTCAGCTTGA TTCGGCCAGA GCTTTTTCGG
CCAATCATGT TGGTGTTGAT TATCGCCATG GCAATCTATA CCTTTAAACG CAAAGATTTT
GGTAGCGCTG CCCGCGAAAC CAAAGCCTCA ACCAAACCAA TTCCTTATGT TTTGTTTTTT
TGTGGCTTGA TTGGTTTTTA TGATGGAATT TTCGGGCCTG GCACTGGCAG TTTATTGATG
TTTGCTTTTG TGGGCATTTT AGGCTTCGAT TTTTTGCAAG CCTCAGCCAC CACCAAAATT
ATTAATGTAA CCACCAACGT CGCAGCTTTG GTGCAATTTC TGGGTGCAGG CCAAATTATC
TGGCATTTGG CTGTACCGAT GGCGGTTTGC AATATTGTGG GCGGCATCAT CGGCTCGCGT
ATGGCCATGG CCAAAGGCAG TCAGTTTGTG CGCGTGATCT TTTTGGTGGT CGTAGTTGGG
GTGATTTTGC GCTATAGCTA CGATATCATT CAAGAATTTA TGTAA
 
Protein sequence
MTLLMLCGFA LLAGFIDAVA GGGGLIQLPP LLITQKDIAP AFILGTNKFA AVTGTATAAV 
SYNRRVKVNW QIVVPGMFSA AICSWLGARA VSLIRPELFR PIMLVLIIAM AIYTFKRKDF
GSAARETKAS TKPIPYVLFF CGLIGFYDGI FGPGTGSLLM FAFVGILGFD FLQASATTKI
INVTTNVAAL VQFLGAGQII WHLAVPMAVC NIVGGIIGSR MAMAKGSQFV RVIFLVVVVG
VILRYSYDII QEFM