Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1139 |
Symbol | |
ID | 5733031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1302340 |
End bp | 1303527 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641278278 |
Product | major facilitator transporter |
Protein accession | YP_001543915 |
Protein GI | 159897668 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000165449 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAGCC GTTTGGCGCT CTGGCGGTCG AATGCACGTC CCGGGGTTCG GGGTAGTTTG TACTATTTAT GTTTTTGGTC AAGCGTTGGG ATGTATATTC CATTCATTAA TGTATATTTC ACCAACCTTG GCTTAAGTGG GCAACAAATA GCCATGTTTG GGGCAATTAG CCCGCTAGCA GTGCTGTTGT TCAACCCATT GGTGGGTGCA ACAGCCGATC GACGTGGCTG GCATGTGCAG TTACTCCTAA GCATGTTGGC CTTAACGGGG TTAAGCCAAA TTGCCTTGGC ATTTCCAACA ACCTTCTTTA CAATCTTGCC AGTGATGGTC GTTTTGGCAG TGGTACGCGG GCCAATTGCG CCATTGGCTG ATAGCATGAT CGCAGGCATG GCCGTGCGTC ATCAACTGGC CTATGGCAAA TTGCGGCTCT GGGGTTCAGT TGGCTATGCC GTCACCTCAT TATTAGGTGG TATTTGGTGG GCCAAAACGG GCTATCCAAC CATGTTTATA TTGACTGGCT TGATGACTGG CTTGGTCGCG ATCGTAGCCA ATAGCCTTGA TCATACGCCT GAATTGCGCA AAACTGCTGC CAAATCGGCG AAAGCGCCCC GTGATGCCGC TTTTATCGCA ATTGTCGTGA TCACTAGTTT GGTTGGGGCT GCCTTTAGCA TGGTTTCAAT GTTCGATGGC AACCTGATTC AACGGATCAG TGGGAGCACC ATCATGCTGG GGGTTTTGCC ATGTGTCATC GCCAGTACCG AAGTGCCAGT GATGCTCAAC GCCGATCGGG TGATCGCTCG CTTTGGCACA GCTAAAACAC TAGCCGTTTC AACCTTGATT CTTGGGCTAG GGTTTATTGG CAGCGGCATG GTGAGCGAAG CTTGGATGTT AATTCCAATT GGCATGTTTC GGGCTTGTGG ATTTGGCTTG TACTCGGTGG CGATCATTCG CCTAATTACC GAGCGCATTC CAACCACCTT GCTGGCAACC GCGCAAGGCT TGATCAGTGC GATTGCTGGT GGTTTGTCGC CGTTGTTGGC TACCCAAGCG GGTGGCTATA TGTTCGATAT ATCAGGGCCA CAATTGGTCT TTATTGCATC AGGCTTGTGC ATTGGCTTGG CAACCTTGGT CGTTTGGCTA GGCTTAAAAC TGAATTGGTT CAAACCAATC GCGCAAACCA ACGCCTAA
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Protein sequence | MGSRLALWRS NARPGVRGSL YYLCFWSSVG MYIPFINVYF TNLGLSGQQI AMFGAISPLA VLLFNPLVGA TADRRGWHVQ LLLSMLALTG LSQIALAFPT TFFTILPVMV VLAVVRGPIA PLADSMIAGM AVRHQLAYGK LRLWGSVGYA VTSLLGGIWW AKTGYPTMFI LTGLMTGLVA IVANSLDHTP ELRKTAAKSA KAPRDAAFIA IVVITSLVGA AFSMVSMFDG NLIQRISGST IMLGVLPCVI ASTEVPVMLN ADRVIARFGT AKTLAVSTLI LGLGFIGSGM VSEAWMLIPI GMFRACGFGL YSVAIIRLIT ERIPTTLLAT AQGLISAIAG GLSPLLATQA GGYMFDISGP QLVFIASGLC IGLATLVVWL GLKLNWFKPI AQTNA
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