| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1136 |
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| Symbol | |
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| ID | 5733028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1297873 |
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| End bp | 1299621 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641278275 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001543912 |
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| Protein GI | 159897665 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGTAA CACTCCAAAT CCAAGACGCA TTAAAACAAT CGACAAATCC TGCCCATACG
ATCGATTTAT TGAATGTATG GGCCGCAAAT TTACGCCACA CCGATTTAGC GCAAGCTTGG
AAATTAAATT ATCAAGCCGA ACATCATGCT CGTAATGGCA TGTTTGCCCA TACTCCTTAT
TATCAAGGTT TAGTTGAATG TTGGTATTGG CGCGGCAAAT TTTATAGCGT GCATAAAAAA
TATGCTGATG CACTTGGTTG TTTTTATAAA GCAATCGAAT ATTGTGATTA TGTTGATGAT
GCATTACTTA GCTTTGAGAA TCAGGCTGCT TGCTATTATC AAGATGCGCC CGATCAGTTT
ATTGAAAATT GGGTTGATAA ATTAGCATTG CATAATATTC TTGGCGTAAC CTTAGCCTTG
CAGTCGCAGC TTGATGCAGC TCTGGAGCAT TATCTGATTG CTGAAGAAAT TGCAATTATG
CACCAAAATG AATGGATGCA AACAATTCTC AATAGCAATA TTGCCTATTT ATATCGTGTG
CTTGAGCAAC CAATCGAGGC CGAAAATTAT TTGCAACGGG CTTTTCAGCG CTTACCCGAA
GCTTTAGAAA CTCAAGCCCA AAAACGTTTG TATGCCACGA TGCTAGATAA TACCTGTTGG
GTTGCGCTTG AACATGGTCA ATTGTACGAT GCTTTAATCT ATGCCAATGC CAGCTTGGAA
TTGTATCAAG CTCTGAATTG GTCGCAGGGC ATTGTCGAGG TTTTGAATAT TCTAGGGGTG
GTTTATCAGC GATTTGATCA AGCTGAACGG GCCATGGCCG AGTTTGAAGC CAGTTTTGAG
TTAGCTCAAC GCCTTGGCTT TCAAGAAGAT ATGATTTTTT CCTTGATCCA GCGTGGTATG
CTAGTAGCAA CCCAACCGGA TTACACCCAA GCCCTAACCT TGATTCACGC TGGTTTGGCC
TTGGCCTTGG ATACCGATGA TCTTAGCCAA CAAGCCTTGG CTCATAAAGC CCTAGCCGAT
GTGTACGAAC AAACCAACGC TTGTGCCGAG GCCTTGTACC ACTTCAAACA CTACCATCAG
ATTCGCGAAA ACCTGTTTAA CGAGCGCTCA GATCAACGGT TACGGCTATT GCAAGTGACA
CATCAAGTAC TTCAGGCTCA ACATCAAGTA CGGTTTTATT ATCAAAAAAC ACAGGAATTG
GTGGCTGAGA TGCAAGAACG TGATCGCCAA CGAATTGAAT TGGAACGATT AGCAACGATC
GATAGCTTAA CTGGCTTATA CAATCGTCGC CATTTTTTGG GCTTGGCTCA AAGCTTGTTG
GAGCAGGCTT GGCAGGCTGG CAATGCTTTG GCCATTTTGC TGTTTGATAT TGATCATTTT
AAGCAAATTA ACGATCGCCA TGGCCATCAT ATTGGCGATC AAATGTTGCA ATTGGTGGCC
ACGACGGCCC AAGCAGCCTT GCGCCAATCT GATTTGCTTG GGCGTTATGG CGGTGAGGAA
TTTGTGGTGA TGCTGACGCG GGTGAGTAAT GCCGAGGCGC TGTTGGTGGC CGAACGCTTG
CGCAGCGCGA TCGAACAGCT AATATTAACC GACAACCAGC AATCGGTTAC GACTTCGATT
AGCGTTGGTT TGACGCTGAG CTACCCGCAT GCTGAAATCC CCTTGGAGCG CTTGATTCAA
CAAGCCGACC ATGCGCTCTA CCAAGCCAAA GCCGCTGGCC GCAACAATGT GCAAATCTAT
TCAGCCTAA
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| Protein sequence | MVVTLQIQDA LKQSTNPAHT IDLLNVWAAN LRHTDLAQAW KLNYQAEHHA RNGMFAHTPY
YQGLVECWYW RGKFYSVHKK YADALGCFYK AIEYCDYVDD ALLSFENQAA CYYQDAPDQF
IENWVDKLAL HNILGVTLAL QSQLDAALEH YLIAEEIAIM HQNEWMQTIL NSNIAYLYRV
LEQPIEAENY LQRAFQRLPE ALETQAQKRL YATMLDNTCW VALEHGQLYD ALIYANASLE
LYQALNWSQG IVEVLNILGV VYQRFDQAER AMAEFEASFE LAQRLGFQED MIFSLIQRGM
LVATQPDYTQ ALTLIHAGLA LALDTDDLSQ QALAHKALAD VYEQTNACAE ALYHFKHYHQ
IRENLFNERS DQRLRLLQVT HQVLQAQHQV RFYYQKTQEL VAEMQERDRQ RIELERLATI
DSLTGLYNRR HFLGLAQSLL EQAWQAGNAL AILLFDIDHF KQINDRHGHH IGDQMLQLVA
TTAQAALRQS DLLGRYGGEE FVVMLTRVSN AEALLVAERL RSAIEQLILT DNQQSVTTSI
SVGLTLSYPH AEIPLERLIQ QADHALYQAK AAGRNNVQIY SA
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