Gene Haur_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1124 
Symbol 
ID5733016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1288723 
End bp1289913 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content50% 
IMG OID641278263 
Producthypothetical protein 
Protein accessionYP_001543900 
Protein GI159897653 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACAA AACGTTTATC AATTAAGCAA CTTGGGAGTG TGCTATTGAT CAGTGCCGCC 
GCAGGCGCTG GCGCACGCTA TCTCGCCAAT AAAACCCGCC AACAAGGCCA AAAAATCTAC
GATTATACAA CCCCACAAAA ACTGATCGAT TGGTCGGTTG CCCGCATGAT TGCCCTGCGA
GTCTCGCAAT GGCAAGAGCA TCCCGTGATC AATCGGGCTG AGCGCCAAGC CGAATACGAT
CAAATGGTTG AGCGCAGCCA GCCCTTAATC GACGATTATT TGAACGTCAA GCTGCCCGAA
ACGCTCTCGC GGGTCAAAGT CGTTGATCGC AAAGAGTGGA TCGATGCCAA TTTGCGTTCA
TTTGAGCGCT TGTTTGAGCC AATTGAGCAA CTTTATCGCC AAGCAGCTCA AAATGCAGGC
CGTAATCCAT CAGTCAATGC GATCAATCGG GCATTTGTCG GCGCACAAGT TGGGGCAATG
GTTGGGGTTT TAGCGCGAAA AGTCCTAGGT CAATACGATC TCAGTTTGCT TTCGCCGCAA
GCTGAGCCAG GTATGCTCTA TTTTGTTGAG CCAAATATTG CCCGCGTGCA ACAAGGTTTG
GGCGTTGATG ATCATGACTT CCGCTTGTGG ATTACGCTGC ATGAAACCAC CCATGCCTAT
GAGTTTGAAG CCTATGGCTG GGTGCGCGAC CATTTCAGCA ACTTAATTCA GCGCTATTTC
AACGAGCTTG GCGGCCAACT CGATGCGCTG CGCAATGGCG TTGGCAACTT CATCAACCGC
ATTTTCAACA ATAGCAAAAC CCCCAACGAT GGCCATTGGA TGGAGCAGCT GTTGACTCCA
ACCCAACGCC AAGTATTTAG CGAACTCCAA GCCTTGATGT CGTTGGTCGA AGGCTATAGC
AACCACATTA TGAATGCGGT TGGCCGCGAA ATTCTGCCAA ACTTCGAGCA GATCGAAGCT
CGCATGAGCG ATCGCAAAGA AAAACGCTCG ATCTTCGATG AATTGTTCAA TCGTATCACA
GGTATGAGCC TCAAAATGCA GCAATACGAA CAAGGCGAAC GCTTCGTTAA TGCAATTGCT
GATCATGGTG GCAAGGAATT AGCTGCCCGT GTTTGGGAAG GCCCAGCAAT GTTGCCAACC
CTCGAAGAAA TTCGCAACCC ACAACTATGG ATCGCCCGCG TTGGCGCATA A
 
Protein sequence
MRTKRLSIKQ LGSVLLISAA AGAGARYLAN KTRQQGQKIY DYTTPQKLID WSVARMIALR 
VSQWQEHPVI NRAERQAEYD QMVERSQPLI DDYLNVKLPE TLSRVKVVDR KEWIDANLRS
FERLFEPIEQ LYRQAAQNAG RNPSVNAINR AFVGAQVGAM VGVLARKVLG QYDLSLLSPQ
AEPGMLYFVE PNIARVQQGL GVDDHDFRLW ITLHETTHAY EFEAYGWVRD HFSNLIQRYF
NELGGQLDAL RNGVGNFINR IFNNSKTPND GHWMEQLLTP TQRQVFSELQ ALMSLVEGYS
NHIMNAVGRE ILPNFEQIEA RMSDRKEKRS IFDELFNRIT GMSLKMQQYE QGERFVNAIA
DHGGKELAAR VWEGPAMLPT LEEIRNPQLW IARVGA