Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1119 |
Symbol | |
ID | 5733011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1281554 |
End bp | 1282369 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278258 |
Product | Cof-like hydrolase |
Protein accession | YP_001543895 |
Protein GI | 159897648 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.78603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGA AATATCGTTT GTTGGCGCTT GATCTTGATG GAACCTTGCT TGATTCACGC TTAGAGCCAA GCGCCGCCAC CAGAGCTGCG ATTGCTGATG CCCAAGCCGC CGGAGTGCAT GTCACAATTG CCACTGGCCG CATGATTCGC ACCGCTCAGC CGTTTGCCGA TATGTTGCAG ATAACCACCC CGCTGATTAC TTACCAAGGC GCACATGTGC AAACCGCCGA TGGCACGGTG CTCTACGATA ATCCCTTGCC CGCCGATTTG GCCGCCGAAG TGGTCGAATT GGCCTTAGCT GAGGGCTTGT ATATTCAGGC CTATATCGAT GATGAGCTGT GGATTGTTGA GCGTAGCCCT GAGGTTGAAG AATATTTGGG CTTTTCGCTG GTCGATATTC CGGTAAATAT TGCCCCCAAC TTGGTTGAAA TTGTGCGCCA AAAACCTGTT ACCAAGCTGG TTTGGATTAC CGACCCAACT GAATTAGAGC GCACAATGCA CGAATGGGGT GAACGCTGGA AAGGTCGCTT GGAGATCTTT CGTTCGCACG ATCATTTTGG TGAGGCGGCG GCGATTGGTA GCTCCAAAGG TGTTGGTTTA GCCGTGCTTG CCGAACATTT GGACATTCCC CAGGCCGAAG TTGCCGCAAT TGGCGATCGC GAAAACGATG CTTCGATGTT GGCGTGGGCA GGCTTTGGCA TGGCTATGGG CAATGCTGAT CGCTTTGCCT TAGCTGCGGC TAATTATGTG TTGCCTGCGC TCAGCGACGA TGGTGCGGCC TATGGCATTC GCCATTTTGT GTTAGGCGAA GAGTAG
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Protein sequence | MTPKYRLLAL DLDGTLLDSR LEPSAATRAA IADAQAAGVH VTIATGRMIR TAQPFADMLQ ITTPLITYQG AHVQTADGTV LYDNPLPADL AAEVVELALA EGLYIQAYID DELWIVERSP EVEEYLGFSL VDIPVNIAPN LVEIVRQKPV TKLVWITDPT ELERTMHEWG ERWKGRLEIF RSHDHFGEAA AIGSSKGVGL AVLAEHLDIP QAEVAAIGDR ENDASMLAWA GFGMAMGNAD RFALAAANYV LPALSDDGAA YGIRHFVLGE E
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