| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1110 |
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| Symbol | |
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| ID | 5733001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1271592 |
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| End bp | 1272164 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278248 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_001543886 |
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| Protein GI | 159897639 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000317198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCC AAGTTTCTAA CCGTTTGACC CGTAGCGCTA CCGACCGCCG TTTTGCAGGC
GTTTGTGGTG GGATTGCCGA ATACTTAGCT ATCGATTCAA TCTGGGTTCG CTTAGCCTTT
GTATTCTTGG TCATGACGGG GATTAGCATT TTACTCTACC CATTGTTGTG GTTTATTATG
CCACGTGGCG CAGTCAGCTA CTTGGCTCAA ACAACCCAAG CCGTCCAACA ACCAGTTAGC
TACCAAGTGG CCCAAAGCGT TGGCGTACAA CCAAGCGTCA ATGCTCGCTT CGACCCAATG
ACTGGCCAAG CCATCAAAGC TGAACCATAT CGCTTTGATC CAGTAACTGG TCAACCAATC
GGTCAAGGCA TTCCGGTCAA CAACATCGCA ACCCCTGTTG CCACGGTTAG CCCAGATGTG
ATCAAAGCTC GCCGTAACTT GTGGCTCAAG AGCGCCTTGG TCATCGGTGG TGCCTTGTTC
CTGAGCAGCA TCTTGGTCGA AATCGCTCCA GTGCTGATTC CAGTTGGTTT GGTCGTCGCT
GGGGTTTGGT TGATCCGCAA CAACAAAATC TAA
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| Protein sequence | MTTQVSNRLT RSATDRRFAG VCGGIAEYLA IDSIWVRLAF VFLVMTGISI LLYPLLWFIM
PRGAVSYLAQ TTQAVQQPVS YQVAQSVGVQ PSVNARFDPM TGQAIKAEPY RFDPVTGQPI
GQGIPVNNIA TPVATVSPDV IKARRNLWLK SALVIGGALF LSSILVEIAP VLIPVGLVVA
GVWLIRNNKI
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