Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1100 |
Symbol | |
ID | 5732991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1260614 |
End bp | 1261480 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278238 |
Product | hypothetical protein |
Protein accession | YP_001543876 |
Protein GI | 159897629 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00431541 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTGC TTGATCACGT TGATTTATCG TTGGATTTGG GCAAAAAAAG CTATGAGCGC CAACTCACCG ATTTGCAATT TAAAATGTTG CGCTTGCAAC GCGCCGTGAC CCAAATTGGG CATCGCATGG TTTTGGTGTT TGAAGGCTGG GATGCGAGCG GCAAGGGCGG TGTGATCAAA CGCCTGACCG AAGCGCTCGA TCCGCGTGGG TTTGTGGTGC ACCCAATTGC CGCACCTACC CCCGAAGAAC GTGCCCACAA TTATCTTTGG CGTTTTTGGA ACCGTTTGCC CCGCGATGGC CAGATAGTTT TATTTGACCG TTCATGGTAT GGTCGCGTGC TGGTGGAGCG GGTTGAAGGC TTTGCGACGA TGCGCGAGTG GAGCCAAGCG TATGGCGAAA TCAACGATTT TGAAAGAATT TTACATAACG ATCGAACGTC GGTCTTGAAA TTTTTCCTGC ATATTTCGAG CGACGAGCAA GAAAAGCGTT TTCGGGAGCG CGAAAATGAT CCGCTGAAAA CCTGGAAATT AACCGAAGAA GATTGGCGCA ATCGTGAGAA ATGGTCGGAA TATGCGATTG CAATTGATGA AATGCTGGCG CGAACATCCA GCGAAAACGC CCCATGGCAA GTGATTGCCG CCAACGACAA ACGTTGGGCA CGGATTGCGA TTCTCAAGGC GGTAGTCGAA ATGTTGGTCG CTGATATGCC GTTTGAATTT GACGATGCTA ATACCTTGGT GCTCGATCGA TCGGGCGCTT ATGCCTTGGT TGATGCGGGC AAACTCTCAG CCAAAGCGGT TGAAGCGGTA ATTGCCGAAG AAGAGAAAGT GCGGAAGTTG CTCAAAAAGC AGCGCAAGGA AAACTAA
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Protein sequence | MSLLDHVDLS LDLGKKSYER QLTDLQFKML RLQRAVTQIG HRMVLVFEGW DASGKGGVIK RLTEALDPRG FVVHPIAAPT PEERAHNYLW RFWNRLPRDG QIVLFDRSWY GRVLVERVEG FATMREWSQA YGEINDFERI LHNDRTSVLK FFLHISSDEQ EKRFREREND PLKTWKLTEE DWRNREKWSE YAIAIDEMLA RTSSENAPWQ VIAANDKRWA RIAILKAVVE MLVADMPFEF DDANTLVLDR SGAYALVDAG KLSAKAVEAV IAEEEKVRKL LKKQRKEN
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