| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1100 |
|---|
| Symbol | |
|---|
| ID | 5732991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1260614 |
|---|
| End bp | 1261480 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278238 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543876 |
|---|
| Protein GI | 159897629 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00431541 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGC TTGATCACGT TGATTTATCG TTGGATTTGG GCAAAAAAAG CTATGAGCGC
CAACTCACCG ATTTGCAATT TAAAATGTTG CGCTTGCAAC GCGCCGTGAC CCAAATTGGG
CATCGCATGG TTTTGGTGTT TGAAGGCTGG GATGCGAGCG GCAAGGGCGG TGTGATCAAA
CGCCTGACCG AAGCGCTCGA TCCGCGTGGG TTTGTGGTGC ACCCAATTGC CGCACCTACC
CCCGAAGAAC GTGCCCACAA TTATCTTTGG CGTTTTTGGA ACCGTTTGCC CCGCGATGGC
CAGATAGTTT TATTTGACCG TTCATGGTAT GGTCGCGTGC TGGTGGAGCG GGTTGAAGGC
TTTGCGACGA TGCGCGAGTG GAGCCAAGCG TATGGCGAAA TCAACGATTT TGAAAGAATT
TTACATAACG ATCGAACGTC GGTCTTGAAA TTTTTCCTGC ATATTTCGAG CGACGAGCAA
GAAAAGCGTT TTCGGGAGCG CGAAAATGAT CCGCTGAAAA CCTGGAAATT AACCGAAGAA
GATTGGCGCA ATCGTGAGAA ATGGTCGGAA TATGCGATTG CAATTGATGA AATGCTGGCG
CGAACATCCA GCGAAAACGC CCCATGGCAA GTGATTGCCG CCAACGACAA ACGTTGGGCA
CGGATTGCGA TTCTCAAGGC GGTAGTCGAA ATGTTGGTCG CTGATATGCC GTTTGAATTT
GACGATGCTA ATACCTTGGT GCTCGATCGA TCGGGCGCTT ATGCCTTGGT TGATGCGGGC
AAACTCTCAG CCAAAGCGGT TGAAGCGGTA ATTGCCGAAG AAGAGAAAGT GCGGAAGTTG
CTCAAAAAGC AGCGCAAGGA AAACTAA
|
|---|
| Protein sequence | MSLLDHVDLS LDLGKKSYER QLTDLQFKML RLQRAVTQIG HRMVLVFEGW DASGKGGVIK
RLTEALDPRG FVVHPIAAPT PEERAHNYLW RFWNRLPRDG QIVLFDRSWY GRVLVERVEG
FATMREWSQA YGEINDFERI LHNDRTSVLK FFLHISSDEQ EKRFREREND PLKTWKLTEE
DWRNREKWSE YAIAIDEMLA RTSSENAPWQ VIAANDKRWA RIAILKAVVE MLVADMPFEF
DDANTLVLDR SGAYALVDAG KLSAKAVEAV IAEEEKVRKL LKKQRKEN
|
|---|
| |