Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1098 |
Symbol | |
ID | 5732989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1257638 |
End bp | 1259182 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641278236 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001543874 |
Protein GI | 159897627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.64226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG CCTATCAACA ATATGTGCAT AAAAGTGTTC GTGGCAAAAT TAGCCTTGCC TTATTGGGCA TTATGCTGAT TGTTGTGCTG GTTTTGTTGA TTCCGCTGCG CTATATTGTC AATAGCTCAA GCCTTTTTGC TGAACAACAG GAAATGCAAG ATCACCTTGA ACGGGTACGA CGAGCAATTA ATAGTGAGCT TGCCCAGATC GATGCCTTGG TCTTGTCGAT GGCAACCTGG GATGAATCAT ACGATTTTAT CAATCAACGT ACTCCCACCT ATATTGAAGA AAATACCAAT AACGAGATTT TTGAGCTGTA TAACGTTCAG GCGATGCTCT ATACCGATCA GAACGGCACA ATTGTGTTCG CCAAAACCTA TGACTCGCAA CAACGGAAGT CGGTGGCAGT GCCATTTGAG TTTTTTGATA TCAACAATTT CTATCCCCAA TTACTCAATC ATCCGCAGCT TGATCAAGGT ACAACTAGCG TGGTGCGGGC TGGCACCAAA CTATGGCTTT TGGCGGCACG ACCAATTCTC ACCAGCGATG CTCAAGGTCC ATCGCGTGGT ACGTTGATTT ATGGTCGGAT GGTCGATCAA GCGGTGGTTG ATCGGATTAA TTACCAAACC TTGTTACCAG TTGAGTTGAG TGATTATCGC TTGCTTGCGC CAACACGGCA GCAGGTTGTC AGCGAATTAG CCAATGAGCA GCGCTTAGTT TCGCGAGCTT TCAACGACGA TACCCTCGAA GGCTTTGTGG TTTTTCCGTC AATCGACGGT AAACCTTTGT TGGTTGCAAC GTTGGCCTTG CCCCGTACAA TTTATATTCA AGGTGAACGC ACCTTCTGGT TAATTGCTAG TGTGGTGGGG ATTGCTGGCT GCTTGGGGTT GTTGAGCCTC TTTTGGGCTT TGCGACGCTT TATTTTCTAT CCGCTAACGT CGATGGTGGG CGATTTGCGC CAGATCGATC CCAATCAGCC TGAGCAACAT CAGATTAATT TTGCTAGCCC CGACGAGCTA GGCTTATTGG CTAAAACCGT CAATCAAGCG CTTGATTCGT TGGCTGTCGC CCAGCGCGAA CAACTGGCGG CTGAGGCCAA ACGTAGCGCC TTGCAAGCCG AAATGCTGCA AAATCAACAA AGCCAATTGC AAACCCAAGC GGCTTTGCTC GAACTCCAAG AGCAAAGTTT GGCCGAACAA GCCTTGCCGT TGATTCCAGT TTCGCGTGAG GTTTTGGCAA TGCCCTTGAT CGGCCAAATC GATTTCAATC GGGCTGAGCG TTTGCAAACC ACGATTTTGC ATGGAATTGA AACCTATCGT GCTCGCACGG TTATCCTCGA TCTGACTGGG ATTTCGCAGC TTGAGCAACG GGCAGCGGTT GCGCTCGGCC AAACGGCCCA AGCCGTGCAA TTGCTTGGGG CACGCTTGTT GCTGACTGGG GCAAACCCAT CAATTGCTGA AGAAATTGTT GCTGCCAATA TCGATTTGGG CCAAATTGCG ATCTATCAAA CCTTGGCTGC TGGTATGCAA GCGGCTCTCC GCTAA
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Protein sequence | MKVAYQQYVH KSVRGKISLA LLGIMLIVVL VLLIPLRYIV NSSSLFAEQQ EMQDHLERVR RAINSELAQI DALVLSMATW DESYDFINQR TPTYIEENTN NEIFELYNVQ AMLYTDQNGT IVFAKTYDSQ QRKSVAVPFE FFDINNFYPQ LLNHPQLDQG TTSVVRAGTK LWLLAARPIL TSDAQGPSRG TLIYGRMVDQ AVVDRINYQT LLPVELSDYR LLAPTRQQVV SELANEQRLV SRAFNDDTLE GFVVFPSIDG KPLLVATLAL PRTIYIQGER TFWLIASVVG IAGCLGLLSL FWALRRFIFY PLTSMVGDLR QIDPNQPEQH QINFASPDEL GLLAKTVNQA LDSLAVAQRE QLAAEAKRSA LQAEMLQNQQ SQLQTQAALL ELQEQSLAEQ ALPLIPVSRE VLAMPLIGQI DFNRAERLQT TILHGIETYR ARTVILDLTG ISQLEQRAAV ALGQTAQAVQ LLGARLLLTG ANPSIAEEIV AANIDLGQIA IYQTLAAGMQ AALR
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