Gene Haur_1088 details

Gene Information

• Locus tag: Haur_1088
• ID: 5732979
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 1245146
• End bp: 1245718
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641278226
• Product: peptidoglycan-binding LysM
• Protein accession: YP_001543864
• Protein GI: 159897617

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0155027
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAACAA GTATTGCTTT TGCCCTCTTT TTTGTCTTGC TTAGCCCCAT TTTGACTGCG 
ATTTTGCTGC GGTTTCTGCG CACCCGCCTA AGTGCTTTGC CGTTCTATTC GATTGCTGGA 
GTGCTTTTCG GGCTGGCGGC AGTTGCAGCG ATTTGGCTGG TCAGTCAGCA TCAAGCCAAT 
GTTCAGCTTG GCAGTTTGGT GCTTATCCAA CAGCAAGGTA TCGATTTGGA AGTGCCGCCT 
GAGGCCGAAC CAACCGCTAT GCCAACCCAA GTATTACCAA CCTTGGCGGC TACTGCAACC 
CGTTTAGCTC CAACCGCGAC AACCCGCCCA AGCGCAACAC CAACCGCTGA ACCAACCGCA 
ACCACTGAAG CTACCGCTGA ACCAACCGCA ACCAGCGAGC CAAGCGCTAC GCCAACTGCC 
GAACGCCGTA CCTACACGGT TGAAGATGGC GACACGTTAC GCTCAATTGC TGAAGCCTTT 
GATGTAACGA TTGCTGAATT GCTCGAAGCC AATGATCTCA CGCCGCAACA AGCTGATCAG 
CTTCAGCCAG GCGATGTGTT GATTATTCCT TAG 

 

Protein sequence

MSTSIAFALF FVLLSPILTA ILLRFLRTRL SALPFYSIAG VLFGLAAVAA IWLVSQHQAN 
VQLGSLVLIQ QQGIDLEVPP EAEPTAMPTQ VLPTLAATAT RLAPTATTRP SATPTAEPTA 
TTEATAEPTA TSEPSATPTA ERRTYTVEDG DTLRSIAEAF DVTIAELLEA NDLTPQQADQ 
LQPGDVLIIP