| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1086 |
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| Symbol | |
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| ID | 5732977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1243345 |
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| End bp | 1244187 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641278224 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001543862 |
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| Protein GI | 159897615 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000482285 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGCC AATCGCCACC AAAAACCGCC TTGATCACCG GAGCGAACTC AGGTATTGGA
CTCGAACTGA CCAAACGGCT GCTCGGCGAA GGCTGGGCAG TGATTGGTTT AATCCGTTCA
CAGTTTCCCA CGAACGAGCC AATTCTTCAA GCGGCCCAAA CTGCGGGTAA ACTCCGCAGC
TATCAAGCCG AAATCAGCGA TTTTACTCAG CTTCGTGCGG CCTTACAAAC AATTAAACAG
CAAGAAACCA GCCTCGATTT GTTGTTCAAC AATGCTGGAA GGGCAACTGA GCAACTAGTT
TTTTCGCCGC AAGGGCGCGA ATTGAGCTTC GAATTGCAGA GCGTCGTGCC GTATATCATC
GCCATGGAGC TGAAAGAATT GCTGTTACGC GGCCAGAACA AAACGATCAT TAATACCTCA
TCGAATGTGC TGTTAGCACT TCGGAAACTG GAGATCGCTC AACTTGAACG ACCGCAAAGC
TTCAAAAAGC TCTTTGGGCC ATATGCAACA TCCAAATTAG CACTTTCGCT CTGGAACCAA
GCGCTTGCGC CACAGCTAGA AAAAGAAGGC ATTAAACTCT ACAGTGTTTG TCCTGGGGGT
AATCGCGGCT CGCTCAAAAC CAATAATGGC TTGCCTTGGT GGCTGCGACC TTTTCATGGC
TTGTTGTTTA AACATCCTAG TAATGGCGCT GAACGTTTGT ATAACACTGC CTTCAATCAG
CAGCAATTTC CAAGTGGTAG TTTTATCAAT AAAGGTAAGC CGACGGCACT TCCCGCAGCG
CAGCAAGCCC ACGCAGTTTT GAACAAAGTT CAAGCAATTT ATCAGCAGGA GTTTGCACCC
TAG
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| Protein sequence | MPSQSPPKTA LITGANSGIG LELTKRLLGE GWAVIGLIRS QFPTNEPILQ AAQTAGKLRS
YQAEISDFTQ LRAALQTIKQ QETSLDLLFN NAGRATEQLV FSPQGRELSF ELQSVVPYII
AMELKELLLR GQNKTIINTS SNVLLALRKL EIAQLERPQS FKKLFGPYAT SKLALSLWNQ
ALAPQLEKEG IKLYSVCPGG NRGSLKTNNG LPWWLRPFHG LLFKHPSNGA ERLYNTAFNQ
QQFPSGSFIN KGKPTALPAA QQAHAVLNKV QAIYQQEFAP
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