Gene Haur_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1080 
Symbol 
ID5732869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp1236433 
End bp1237401 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content52% 
IMG OID641278218 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001543856 
Protein GI159897609 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00570901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG TGTACGATAT TTTGATCATT GGCGGCGGAC CATCGGCATT GGCTGCGGCA 
TTTTATGCCC AAAACAAGCA ATTACGCACG CTGATGATTT ACGCCGACCT CGGCGGCAAA 
GCTGGCTGGG CGCATAACCG TACCGTCAAC GGCACGATCA ACGTTCTGCC CGGACACGAT 
CTAGTGGAAC GGCTGATTAG CCAGCTTTCG AATCACCAAT CGTCGGTCGC CCACATTAAT 
GATCGGGTTG TCGGGCTGCG CAAAACTAAT AGCATGTTTG TGGTTGATAC CCAACAATAC 
GGCGAACGCT ATGCCCGTTC GGTTGTAGTT GCCAGCGGTG CAGCTCCCAA TCGCTTGCCC 
TTACCAGGTA TTCAACATTT GTTCGGAGTG GGCTTGGGCT ATTCAATCAC AACCTTTGCC 
CATCAAACCC AAGGCCAACG GGTGGCGGTC TATGGCGTAA CTCCGCGTAC AATTCGCGGG 
GTCGCCGAAA TCGTCTTAGG CTCGAACCAT ATCTATTGGG TCAGCCCAGA TGAAGATTTG 
CCAGAAGTGC CTTTAGTCGA TGCCATTCGG CGCATGCCCA ATGTCACAAT CATTCCCCAA 
GCCACCATCC GCGATGTCGT GGGGATCAAT TCGGTCAAGC AGATTGTGAT TGAACGCGGC 
ACATCGTTGC AGCATATTCC GGTTGATCGG CTATTTGTCG ATATTGGCAT TCAGCCAAAT 
ACTGGCTTCC TGAACAATGG CAACGTCGAT GTGCTCGATG AAGATGGCTT TGTGATTGTC 
GATGAATATA ATAGCTCGCC CTGCCACGGT ATTTTTGCCG CTGGCGATGT GAGCAACAGT 
GTTCTTGGTG AACAAGTGTT AATTGCGATT GGCGATGGCG TTCGCGCCGC CGTCAGTGCC 
TACGAATACC TGCTTGTTCA TAAGCTCACG CTTGAAGAAG TGAGCCACGC AGCCGGCAAG 
ACTGCTTAA
 
Protein sequence
MSIVYDILII GGGPSALAAA FYAQNKQLRT LMIYADLGGK AGWAHNRTVN GTINVLPGHD 
LVERLISQLS NHQSSVAHIN DRVVGLRKTN SMFVVDTQQY GERYARSVVV ASGAAPNRLP 
LPGIQHLFGV GLGYSITTFA HQTQGQRVAV YGVTPRTIRG VAEIVLGSNH IYWVSPDEDL 
PEVPLVDAIR RMPNVTIIPQ ATIRDVVGIN SVKQIVIERG TSLQHIPVDR LFVDIGIQPN 
TGFLNNGNVD VLDEDGFVIV DEYNSSPCHG IFAAGDVSNS VLGEQVLIAI GDGVRAAVSA 
YEYLLVHKLT LEEVSHAAGK TA