Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1078 |
Symbol | |
ID | 5732867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1234678 |
End bp | 1235634 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278216 |
Product | ROK family protein |
Protein accession | YP_001543854 |
Protein GI | 159897607 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC TCTGGAATAG CCTTAAGCAA CAAATTGCCC AGCACAATTG GGGATTATTT GGGCCAACGA GCTATGTGCT GGGGGTTGAT TTAGGCAGTT ATGGCATTCG CGCGGTTGTC ACTGATATTT GTGGGCAACA CCTGTTCCAT GCCGCCACCG AGCTTGCTCC CGAAAGCACC GCCACAACTG TGCTTGAACA AAGTTTTAGT TTGATTCACG AATTGCTTGA AACCAATAAT GTGCCAAGCC AGCAACTGGT GCGGATTGGC GTGGGCTTTG GTGGCCCGGT CGATGCGCTA CGTGGGGTTA CGCGTCGTTC ATATCGCATG GCTGGTTGGA ACGATTTGAA TGTTTGCGAG CAATTTGAAG CCGCTTTTGA TGCTCAAACA TTGATCGAAA ATGATGCGAG CTTGATTGCT TTTGGCGAAT ATATGTTTGG CGCTGGCCGT GATGTCCAAG ATTTATATTA TTTGCATTTG AGCACAGGTG TTGGTAGTGG TTTGGTGCTG AATGGCCAAC TGCATCGCGG CATAACCACC AGCGCAGGCG AAATCGGCCA TGCCCGTTAT TCCTTGAACC ATCAGCGCGA AATTGAAGAT TTGCTCTCGA TTCGCGGCTT ATTAGCCCGC GCCAATGAAC TTGGCCTACA AACCGATGAT CTTGATGTGT TGTTCAATGA TGCCAATGCT GGAGCTAAAA CGATTAGCGA AGCAGTTGAA GTGCTTGGTT TAGGCTTGGC TGGCGTGGTG CAATTGCTTG ATCCAGCCTT GTTGGTGCTT GGCGGGATTG TCACGCGCAA GGGTGGTGAT GCGCTGTGCA GCGCGGTCGA AACCCAAGTT AATCAATTAA TTAGCCCAAC GCCTCCGCGC CATATTGCAG TTGTGCACTC GTTGTTGGGA GCCGAAGCAG TGGCGATTGG TGGTTTGGCC TTGGCTTTGC AAAGCCTCAA TCAATAG
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Protein sequence | MSELWNSLKQ QIAQHNWGLF GPTSYVLGVD LGSYGIRAVV TDICGQHLFH AATELAPEST ATTVLEQSFS LIHELLETNN VPSQQLVRIG VGFGGPVDAL RGVTRRSYRM AGWNDLNVCE QFEAAFDAQT LIENDASLIA FGEYMFGAGR DVQDLYYLHL STGVGSGLVL NGQLHRGITT SAGEIGHARY SLNHQREIED LLSIRGLLAR ANELGLQTDD LDVLFNDANA GAKTISEAVE VLGLGLAGVV QLLDPALLVL GGIVTRKGGD ALCSAVETQV NQLISPTPPR HIAVVHSLLG AEAVAIGGLA LALQSLNQ
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