Gene Haur_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1078 
Symbol 
ID5732867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1234678 
End bp1235634 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content50% 
IMG OID641278216 
ProductROK family protein 
Protein accessionYP_001543854 
Protein GI159897607 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC TCTGGAATAG CCTTAAGCAA CAAATTGCCC AGCACAATTG GGGATTATTT 
GGGCCAACGA GCTATGTGCT GGGGGTTGAT TTAGGCAGTT ATGGCATTCG CGCGGTTGTC
ACTGATATTT GTGGGCAACA CCTGTTCCAT GCCGCCACCG AGCTTGCTCC CGAAAGCACC
GCCACAACTG TGCTTGAACA AAGTTTTAGT TTGATTCACG AATTGCTTGA AACCAATAAT
GTGCCAAGCC AGCAACTGGT GCGGATTGGC GTGGGCTTTG GTGGCCCGGT CGATGCGCTA
CGTGGGGTTA CGCGTCGTTC ATATCGCATG GCTGGTTGGA ACGATTTGAA TGTTTGCGAG
CAATTTGAAG CCGCTTTTGA TGCTCAAACA TTGATCGAAA ATGATGCGAG CTTGATTGCT
TTTGGCGAAT ATATGTTTGG CGCTGGCCGT GATGTCCAAG ATTTATATTA TTTGCATTTG
AGCACAGGTG TTGGTAGTGG TTTGGTGCTG AATGGCCAAC TGCATCGCGG CATAACCACC
AGCGCAGGCG AAATCGGCCA TGCCCGTTAT TCCTTGAACC ATCAGCGCGA AATTGAAGAT
TTGCTCTCGA TTCGCGGCTT ATTAGCCCGC GCCAATGAAC TTGGCCTACA AACCGATGAT
CTTGATGTGT TGTTCAATGA TGCCAATGCT GGAGCTAAAA CGATTAGCGA AGCAGTTGAA
GTGCTTGGTT TAGGCTTGGC TGGCGTGGTG CAATTGCTTG ATCCAGCCTT GTTGGTGCTT
GGCGGGATTG TCACGCGCAA GGGTGGTGAT GCGCTGTGCA GCGCGGTCGA AACCCAAGTT
AATCAATTAA TTAGCCCAAC GCCTCCGCGC CATATTGCAG TTGTGCACTC GTTGTTGGGA
GCCGAAGCAG TGGCGATTGG TGGTTTGGCC TTGGCTTTGC AAAGCCTCAA TCAATAG
 
Protein sequence
MSELWNSLKQ QIAQHNWGLF GPTSYVLGVD LGSYGIRAVV TDICGQHLFH AATELAPEST 
ATTVLEQSFS LIHELLETNN VPSQQLVRIG VGFGGPVDAL RGVTRRSYRM AGWNDLNVCE
QFEAAFDAQT LIENDASLIA FGEYMFGAGR DVQDLYYLHL STGVGSGLVL NGQLHRGITT
SAGEIGHARY SLNHQREIED LLSIRGLLAR ANELGLQTDD LDVLFNDANA GAKTISEAVE
VLGLGLAGVV QLLDPALLVL GGIVTRKGGD ALCSAVETQV NQLISPTPPR HIAVVHSLLG
AEAVAIGGLA LALQSLNQ