| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1068 |
|---|
| Symbol | |
|---|
| ID | 5732972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1220351 |
|---|
| End bp | 1220893 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641278203 |
|---|
| Product | dual specificity protein phosphatase |
|---|
| Protein accession | YP_001543844 |
|---|
| Protein GI | 159897597 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCAG TTTTGCAGCA TTGGTTTTAT GTTTTGCGCT CACATTTAGT CATGGGAACT
CGCCGGCTCT ATCGGCGGCT TGGTGGCAAG GTTAAGCCGC GTACCAACCA AATTACCGAG
CAACTCTACC TCGGCGGTTT TTTCGATCTC CACGATTGGC AAATTTTACA TGCCCAAGGT
GTGCAGGTTG TAGTCAATCT CCAAGCCGAG CGCCAAGATC AGTTTGGCAC GCTCGGCAAT
CAGGGCTACT TATGGCTGCC AACCATGGAT CGCCAAGCAC CTAGCCCTGA AGCACTACAA
CAAGGCGTGG TTTTTGTGCA ACAAGCCATC CAGGCCGATC ATAAAGTGTT GATCCATTGT
CACGCTGGCA TGAGCCGTTC GGCCACCTTA TGTACAGCCG TACTGATTGC CCAAGGCATG
GATTTGGAAA GCGCATGGAA TTTAGTTAAG GCGCGTCGCC CAATTGTTCA CTTGCATCCC
TGGCAACGCC GAGCTTTAGA GCAATTTGCC CGCGATTGGG CACAGCAAGG AGCAGAATTA
TGA
|
|---|
| Protein sequence | MLAVLQHWFY VLRSHLVMGT RRLYRRLGGK VKPRTNQITE QLYLGGFFDL HDWQILHAQG
VQVVVNLQAE RQDQFGTLGN QGYLWLPTMD RQAPSPEALQ QGVVFVQQAI QADHKVLIHC
HAGMSRSATL CTAVLIAQGM DLESAWNLVK ARRPIVHLHP WQRRALEQFA RDWAQQGAEL
|
|---|
| |