Gene Haur_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1061 
Symbol 
ID5732965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp1213849 
End bp1214949 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID641278196 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001543837 
Protein GI159897590 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC CCACTTGGGC GGTGGAACTC GACCACGTAA CCAAAGAATT TCGCGGCAGC 
GTAGCCGTTC GTGATATTTC GTTAAAGATC GCGGACGGTG AATTTTTTTC GCTGCTTGGC 
CCCTCTGGCT GTGGTAAAAC CACATTGCTT CGTATGATTG CTGGCTTTGA AAACCCTAGT 
AGTGGCGACA TTTATATTGA AGGTGTGTTG ATGGGCGAAA CCCCAGCCAA TCGCCGCGAT 
GTCAATACGG TTTTTCAGAG TTATGCCTTA TTTCCCCATA TGTCGGTGGC CGAAAACGTG 
GCTTTTGGCT TGCACATGAA AAACATCAAC AAGGCCGATA TTGCTACGCG AGTGAAGCAA 
GCCTTGGATA TGGTGCAACT TGGTGCATTT GGTGATCGTC GTCCGAAGCA ACTTTCTGGC 
GGTCAGCAAC AACGGGTTGC CTTAGCCCGC GCCTTGATCA ACGAGCCAGA AGTTTTGTTG 
CTCGACGAAC CCTTAGCGGC GCTTGATTTG AAGCTGCGTA AAGAAATGCA ATTGGAACTC 
AAGAGTATTC AGCAGCGCTT GGGCATTACC TTTATCTTTG TCACCCACGA TCAAGAAGAA 
GCCTTGACTA TGAGCGACCG GATTGCGGTG ATGGAATTGG GCAAGGTGCT GCAAGTTGGG 
CAGCCTACCG AAATTTATGA ACGCCCCAAA ACGCGCTTTG TCGCCGATTT TATTGGCGAA 
TGCAATTTTA TTGATGGCAC GGTACTGGCG GTTGAAAATG GCGCGGTAAC TTTGGAGACT 
GACGGCGGTG TGCGGGTGGT GGGTACTGGC ATGTTTCCAG TTGCTGCTGG CGATCATGCA 
GTGCTAGCCG TCCGGCCTGA GAAAGTTCGA TTGGTTGAAG GCCAACAGCC CCAAGGTACA 
AATGTATTTG CTGCAATTGT TGAGCGCGTC GCCTATATTG GCTCTGATAC GCGGATTATT 
GTGCGTTTGC CTGATGGTTC GCCGTTTGAT GTATGGGAAG CCAACACCGT TTCGACGCTT 
GATCCAAACC AATATTATAC TGCTGGCGAC CCAGTGTATG TGACATGGGC CACTCAAAAT 
AGCCTCATTC TCGAACGTTA A
 
Protein sequence
MNTPTWAVEL DHVTKEFRGS VAVRDISLKI ADGEFFSLLG PSGCGKTTLL RMIAGFENPS 
SGDIYIEGVL MGETPANRRD VNTVFQSYAL FPHMSVAENV AFGLHMKNIN KADIATRVKQ 
ALDMVQLGAF GDRRPKQLSG GQQQRVALAR ALINEPEVLL LDEPLAALDL KLRKEMQLEL 
KSIQQRLGIT FIFVTHDQEE ALTMSDRIAV MELGKVLQVG QPTEIYERPK TRFVADFIGE 
CNFIDGTVLA VENGAVTLET DGGVRVVGTG MFPVAAGDHA VLAVRPEKVR LVEGQQPQGT 
NVFAAIVERV AYIGSDTRII VRLPDGSPFD VWEANTVSTL DPNQYYTAGD PVYVTWATQN 
SLILER