Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1056 |
Symbol | |
ID | 5732960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1204973 |
End bp | 1205998 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278191 |
Product | periplasmic binding protein |
Protein accession | YP_001543832 |
Protein GI | 159897585 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGG TTCGATTTAG CCGATTTTTG AGCGTTTTCT TGTTGTTGGG CAGCCTTGTA GCTTGTGACG CTGCCGAAAA TGGCGTGACC CAATTACCAG CGACAACTGT GCCGCCAACC GCCACAACTG ATAGTGCTGC CGTAGCACCA ACCGCCGAAT TGACTCCAAC TGAAACTAGT AGCATCAGCT ATCCTTTGAC GATCAAGGAT AGCCTCGGGC GCGAAGTAAC TCTACAAGCA GCACCCAGCC GGATCGTCTC GTTAGCGCCA TCGAATACCG AAATTCTGTT TGCGGTTGGC GCGGGCGATG CGTTGGTCGG CGTGACCAAA TATTGCAATT ATCCCGAAGC AGCCAAAAGC ATCGATCAAA TTGGCGGCTT CTCGGCCAAA ACGATTAGCC TTGAAACCAT CGTTGCGCTC AAGCCCGATG TTGTGTTTTC GGGCGATGAA AGCCAACAAA TCGTGATCGA TGCCCTCACC CAAGCCAATA TTCCGGTGAT CGCGATCAAA GCTGAAACCT TCGAGGCGGT CTATCAAAAC ATCAATTTGA TTGGTCAAGC GACGAATCAT CCAACTGAGG CGGCCCAAGT TGTGGCCGAG ATGCAAGCCC GCATCGATGC AGTAACCGCC AAAACCAGCA CGCTGGCGGC TGCCGATAAA TTAAGCGTGT TCTATGAAGT TTATGATGAG CCATTGATGA CCGCTGGCCC GCAAACCTTT ATCGGCCAAA TGCTTGAACT CGCTGGCGCA ACCAATATTT TTGCCGATGT GAGCGAAGAG TATCCCGAAA TCAGCGCCGA AGAAGTGGTC AATCGGCAGC CAGCGGTGAT CATCGGGCCT GAATCGCATG GCGATAAACT GACGATTGAT CTGATCGCCC AACGCCCAGG CTGGGGTGCA ATCAAGGCAG TCAAGGAGGG CAAGATCGTC GTTTTGAATG GTGATATGCT TTCGCGGCCA GGCCCACGCT TGGCCGATGC CTTAGAAGCA CTGAGCCAAG CCTTGTATCC AGAATTGTTT AACTAA
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Protein sequence | MTKVRFSRFL SVFLLLGSLV ACDAAENGVT QLPATTVPPT ATTDSAAVAP TAELTPTETS SISYPLTIKD SLGREVTLQA APSRIVSLAP SNTEILFAVG AGDALVGVTK YCNYPEAAKS IDQIGGFSAK TISLETIVAL KPDVVFSGDE SQQIVIDALT QANIPVIAIK AETFEAVYQN INLIGQATNH PTEAAQVVAE MQARIDAVTA KTSTLAAADK LSVFYEVYDE PLMTAGPQTF IGQMLELAGA TNIFADVSEE YPEISAEEVV NRQPAVIIGP ESHGDKLTID LIAQRPGWGA IKAVKEGKIV VLNGDMLSRP GPRLADALEA LSQALYPELF N
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