Gene Haur_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1018 
Symbol 
ID5732922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1164919 
End bp1165431 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content48% 
IMG OID641278153 
Productshikimate kinase 
Protein accessionYP_001543794 
Protein GI159897547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGC ATCGCAATGT GATTTTAATT GGCATGCCTG GATCGGGCAA AAGTACGCTG 
GGCATTTTAT TAGCTAAAGC CTTAGTTTTT GATTTTATTG ATACCGATGT GGTGATTCAA
ACCCGCCAGC ATGGCCGCTT GATTGAGATT CTCGAACGGC TAGGCGCTGA GCAATTTTGT
GCGGTCGAAA ATCAATATTG CGCTGAGCTA GAGCTTGATC AATATGTGGT GGCGACTGGT
GGCAGCGTGA TTTATAGCCC CGATGCTATG GCCAATTTCC AGCGGCTTGG CACAATCGTC
TATCTTTCAA TCGCATTCGA TGAACTGTTG CCACGCATCA CCGATATGGA TTCGCGGGGA
ATTGTGATGC AGCCAGGCCA AAGTTTTGCC GATTTATATG CCGAGCGCGT GCCGCTGTAT
CGCCAATTTG CCAATATCAC CGTAGATTGC ACTGGCGAAG ATCATGAACA CACCGTTAGC
CAAATTATGG CTGCATTAAA CGCCGATAAT TAA
 
Protein sequence
MAQHRNVILI GMPGSGKSTL GILLAKALVF DFIDTDVVIQ TRQHGRLIEI LERLGAEQFC 
AVENQYCAEL ELDQYVVATG GSVIYSPDAM ANFQRLGTIV YLSIAFDELL PRITDMDSRG
IVMQPGQSFA DLYAERVPLY RQFANITVDC TGEDHEHTVS QIMAALNADN