Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1018 |
Symbol | |
ID | 5732922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1164919 |
End bp | 1165431 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641278153 |
Product | shikimate kinase |
Protein accession | YP_001543794 |
Protein GI | 159897547 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAGC ATCGCAATGT GATTTTAATT GGCATGCCTG GATCGGGCAA AAGTACGCTG GGCATTTTAT TAGCTAAAGC CTTAGTTTTT GATTTTATTG ATACCGATGT GGTGATTCAA ACCCGCCAGC ATGGCCGCTT GATTGAGATT CTCGAACGGC TAGGCGCTGA GCAATTTTGT GCGGTCGAAA ATCAATATTG CGCTGAGCTA GAGCTTGATC AATATGTGGT GGCGACTGGT GGCAGCGTGA TTTATAGCCC CGATGCTATG GCCAATTTCC AGCGGCTTGG CACAATCGTC TATCTTTCAA TCGCATTCGA TGAACTGTTG CCACGCATCA CCGATATGGA TTCGCGGGGA ATTGTGATGC AGCCAGGCCA AAGTTTTGCC GATTTATATG CCGAGCGCGT GCCGCTGTAT CGCCAATTTG CCAATATCAC CGTAGATTGC ACTGGCGAAG ATCATGAACA CACCGTTAGC CAAATTATGG CTGCATTAAA CGCCGATAAT TAA
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Protein sequence | MAQHRNVILI GMPGSGKSTL GILLAKALVF DFIDTDVVIQ TRQHGRLIEI LERLGAEQFC AVENQYCAEL ELDQYVVATG GSVIYSPDAM ANFQRLGTIV YLSIAFDELL PRITDMDSRG IVMQPGQSFA DLYAERVPLY RQFANITVDC TGEDHEHTVS QIMAALNADN
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