Gene Haur_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1017 
Symbol 
ID5732921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1163272 
End bp1164564 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content53% 
IMG OID641278152 
Productisocitrate lyase 
Protein accessionYP_001543793 
Protein GI159897546 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA CGAACGGTAT CTCAACAACA GAACTGGAAC GGGGTTGGGC AACGGACGCA 
CGTTGGCAAG GGATTCAGCG CGATTACACA GCCGAAGATG TTGTGCGCTT GCGCGGTTCA
GTGATTATTG AGCAAACTTT AGCTCGGATG GGTGCTGAAC GCTTGTGGGA TCTCCTTCAC
ACCGAAGATT ACGTGCATGC GTTGGGTGCG CTGACTGGTA ATCAAGCCAT GCAGATGGTC
AAAGCAGGCT TGAAGGCGAT TTACTTGAGT GGCTGGCAGG TTGCCGCCGA TGCCAATATG
GCTGGGCAAA TGTATCCCGA TCAAAGCTTG TATCCCGCTA ACAGCGTGCC ACAAGTTGTC
AAACGGATCA ACCAAACCTT GCAACGCTGC GACCAAATTT ATCACTCAGA AGCTAAAGAT
GGTACCTACT GGTTCGCGCC CATCATCGCC GATGCTGAAG CTGGCTTTGG TGGCCCACTG
AATGCCTTTG AAATGATGAA GGCTATGATC GAAGCTGGCG CGGCTGGGGT GCACTTCGAA
GATCAATTAT CATCAGAAAA GAAATGTGGC CACTTGGGCG GCAAGGTCTT GATCCCAACG
AGCCACTTTA TTCGCACGCT GCAAGCTGCC CGTTTGGCTG CCGACGTGAT GGACGTACCA
ACCTTGGTCG TCGCTCGTAC CGATGCCAAC GGTGCATACC TCTTGACCAG CGACGTTGAT
CCACGTGACC GCGAGTTTTG TACAGGCGAA CGCACCCCCG AAGGCTTCTT CTGTATTCGC
GGTGGGATCG ATTCAGCAAT TGCCCGTGGC TTGGCCTATG CTCCATATGC CGACCTGATT
TGGTGTGAAA CCTCAACCCC AGATTTGGAA GAAGCACGGA AATTTGCTGA AGCGATCCAT
GCTCAATATC CAGGCAAATT GTTGGCCTAC AACTGCTCGC CATCATTCAA CTGGAAGCGC
AACTTGGATG ATGCCACGAT TGCCAAGTTC CAAAGCGAAC TCGGCGCGAT GGGTTACAAG
TTCCAATTCA TCACCTTGGC GGGCTTCCAC GCCTTGAACT ACAGCATGTT CGATTTGGCA
ACCGGCTATC GCGACCAAGG CATGAGCGCC TATGTGCAAT TGCAACAAGC TGAATTCAAC
CGCGAAAGCG AAGGCTATAC CGCCGTCAAG CACCAACGCG AAGTTGGCAC TGGCTACTTC
GATTTGGTTG CGCAAGCAGT TTCAGGTGGC ATGTCATCGA CCACCGCCTT GAGCGGCTCG
ACCGAGCACG AACAATTTGT TGGAGCCCAT TAG
 
Protein sequence
MNTTNGISTT ELERGWATDA RWQGIQRDYT AEDVVRLRGS VIIEQTLARM GAERLWDLLH 
TEDYVHALGA LTGNQAMQMV KAGLKAIYLS GWQVAADANM AGQMYPDQSL YPANSVPQVV
KRINQTLQRC DQIYHSEAKD GTYWFAPIIA DAEAGFGGPL NAFEMMKAMI EAGAAGVHFE
DQLSSEKKCG HLGGKVLIPT SHFIRTLQAA RLAADVMDVP TLVVARTDAN GAYLLTSDVD
PRDREFCTGE RTPEGFFCIR GGIDSAIARG LAYAPYADLI WCETSTPDLE EARKFAEAIH
AQYPGKLLAY NCSPSFNWKR NLDDATIAKF QSELGAMGYK FQFITLAGFH ALNYSMFDLA
TGYRDQGMSA YVQLQQAEFN RESEGYTAVK HQREVGTGYF DLVAQAVSGG MSSTTALSGS
TEHEQFVGAH