Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1017 |
Symbol | |
ID | 5732921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1163272 |
End bp | 1164564 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641278152 |
Product | isocitrate lyase |
Protein accession | YP_001543793 |
Protein GI | 159897546 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACCA CGAACGGTAT CTCAACAACA GAACTGGAAC GGGGTTGGGC AACGGACGCA CGTTGGCAAG GGATTCAGCG CGATTACACA GCCGAAGATG TTGTGCGCTT GCGCGGTTCA GTGATTATTG AGCAAACTTT AGCTCGGATG GGTGCTGAAC GCTTGTGGGA TCTCCTTCAC ACCGAAGATT ACGTGCATGC GTTGGGTGCG CTGACTGGTA ATCAAGCCAT GCAGATGGTC AAAGCAGGCT TGAAGGCGAT TTACTTGAGT GGCTGGCAGG TTGCCGCCGA TGCCAATATG GCTGGGCAAA TGTATCCCGA TCAAAGCTTG TATCCCGCTA ACAGCGTGCC ACAAGTTGTC AAACGGATCA ACCAAACCTT GCAACGCTGC GACCAAATTT ATCACTCAGA AGCTAAAGAT GGTACCTACT GGTTCGCGCC CATCATCGCC GATGCTGAAG CTGGCTTTGG TGGCCCACTG AATGCCTTTG AAATGATGAA GGCTATGATC GAAGCTGGCG CGGCTGGGGT GCACTTCGAA GATCAATTAT CATCAGAAAA GAAATGTGGC CACTTGGGCG GCAAGGTCTT GATCCCAACG AGCCACTTTA TTCGCACGCT GCAAGCTGCC CGTTTGGCTG CCGACGTGAT GGACGTACCA ACCTTGGTCG TCGCTCGTAC CGATGCCAAC GGTGCATACC TCTTGACCAG CGACGTTGAT CCACGTGACC GCGAGTTTTG TACAGGCGAA CGCACCCCCG AAGGCTTCTT CTGTATTCGC GGTGGGATCG ATTCAGCAAT TGCCCGTGGC TTGGCCTATG CTCCATATGC CGACCTGATT TGGTGTGAAA CCTCAACCCC AGATTTGGAA GAAGCACGGA AATTTGCTGA AGCGATCCAT GCTCAATATC CAGGCAAATT GTTGGCCTAC AACTGCTCGC CATCATTCAA CTGGAAGCGC AACTTGGATG ATGCCACGAT TGCCAAGTTC CAAAGCGAAC TCGGCGCGAT GGGTTACAAG TTCCAATTCA TCACCTTGGC GGGCTTCCAC GCCTTGAACT ACAGCATGTT CGATTTGGCA ACCGGCTATC GCGACCAAGG CATGAGCGCC TATGTGCAAT TGCAACAAGC TGAATTCAAC CGCGAAAGCG AAGGCTATAC CGCCGTCAAG CACCAACGCG AAGTTGGCAC TGGCTACTTC GATTTGGTTG CGCAAGCAGT TTCAGGTGGC ATGTCATCGA CCACCGCCTT GAGCGGCTCG ACCGAGCACG AACAATTTGT TGGAGCCCAT TAG
|
Protein sequence | MNTTNGISTT ELERGWATDA RWQGIQRDYT AEDVVRLRGS VIIEQTLARM GAERLWDLLH TEDYVHALGA LTGNQAMQMV KAGLKAIYLS GWQVAADANM AGQMYPDQSL YPANSVPQVV KRINQTLQRC DQIYHSEAKD GTYWFAPIIA DAEAGFGGPL NAFEMMKAMI EAGAAGVHFE DQLSSEKKCG HLGGKVLIPT SHFIRTLQAA RLAADVMDVP TLVVARTDAN GAYLLTSDVD PRDREFCTGE RTPEGFFCIR GGIDSAIARG LAYAPYADLI WCETSTPDLE EARKFAEAIH AQYPGKLLAY NCSPSFNWKR NLDDATIAKF QSELGAMGYK FQFITLAGFH ALNYSMFDLA TGYRDQGMSA YVQLQQAEFN RESEGYTAVK HQREVGTGYF DLVAQAVSGG MSSTTALSGS TEHEQFVGAH
|
| |