| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1008 |
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| Symbol | |
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| ID | 5732912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1152262 |
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| End bp | 1153950 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641278143 |
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| Product | CHAP domain-containing protein |
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| Protein accession | YP_001543784 |
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| Protein GI | 159897537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3942] Surface antigen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00120354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAACC ACCACTGGCG GATCTGCTTA ATTGTAGGAC TTTTAGTAAG TCTTGGTCTA
TGGATGCAGC CTGCTAATGC GAACAAATCG TCAGATCCAA ATCGCTTGAT TGAGCCATCG
ATGGGTTTCG AGTTTGCTCA GCTCGATCAG TGGATACCAA GTATTTTTGC TGAGAATGGC
CCGCAAACAA ACTCACAAGT TGCCCAACGC AGCATTGGAT TTGTCCATCG CACAACCCCT
TCATTATTGG CAATTGTCAG TAGTTTCGCA AACCCGAAAG CGTTAAGTAG TAGCGGCTGG
ATTAAACGCT ATGATTATCG ACGAACTAAT GCTGCATATC AGATTGAAAC TATCGAATGG
CAAAAACGCA GTGTGCAGTT AATTAGTGAA CATCAGTTGA GTCGTCAAGC CCATGGAACT
CCCGATCATT TACGCTTGAT CATCGCGATC AATCAGCAGA TTATGGTTTT TGAATATATT
GGCTATAGCA TCAATCGGGC TGAATTCCTC GCTTGGCTTG AGCAGATCAC CCTAATTCCA
GCCCAAAAAT TCCAAGCATC ACCGTTGAGC AACGATGTTA AAGAGGCATT TGCTCAAGCT
AACCAGCCTT TAGCTGTATC AATCCAAAAT TGCTGTGGGG TTAGTGACCC TGAATTCAAT
CCTTTTCCTT GTAATAGCAG CGTTGGCAAT GGCAATTGTA CGTGGTGGGT CCGCTACCGC
CGAACAGGCA ACAATATTGC CAATTTATCT AATTGTACTG GCAACGCGGA TACATGGGAT
GAATGTGCTG CCAGCTCTTA TCCACAATTA CTCAGTGATA CGCCCAGCGT CAAAAGTGCC
GTGGTTTGGA CAAACATAAA TCATGTAGCA TTTTTGGAAC AAGTTAATAG CCCAACCAGC
ATTACGATGT CGCAAATGAA TTGGTATAGT CCATGTCCGC AATCAACTAT CACCCAAGGG
ATTACAAATA AGAAATTTAT TCGCCACCCT GATGCCATTC AACCCGAACC CGCAAAGCGT
TGGCATCTGA GCTACAATTT ATCAAGCGGC AATGCCGAGT TATCCTTTAA TTATGGCTTG
AAATCGGATA AAGCGGTAAT TGGCGATTGG AATGGTGATG GTATTGATAC GCCAGGGGTT
GTACGTGGCA ATACTTGGTA TCTTTCAAAC ACCTATGGCG AACCACATAC CATCAGTTTT
GAATTCGGTG ATCCCAATGA TATTCCGGTG GTTGGCGATT GGAACGGCGA TGGCAAAGAT
ACCCCTGGCC TTGTTCGCGG AACGACTTGG TATATCTCAA ACAACCTGAA TGGCGGCTGG
GCCGAACGAT CCTTCGGCTT TGGTGAGGCT GGCGACAAAC CCGTGGTTGG CGATTGGAAC
GGCGATGGCA AAGATAGCCC TGGGGTTGTG CGCGGCATAA CATGGTATCT TTCCAATAAT
CTTAATGGCG GCTGGGCTGA TATTTCGCTT GGCTTTGGTG AGCTAGGCGA TACATTCATC
GTGGGCGATT GGGATGGCGA TGGTGATGAT ACCCCTGGGG TTGTGCGTGG CAATATGTGG
TATCTCTCCA ACAACCTCAA TGGTGGTTGG GCCAATCTCT CCTTCATGTA TGGCGATCCC
GGTAACTATC CAATTGTTGG TAATTGGGGT GATAGCGATC GGAATAGTGA GATTGGCGTA
ATTCCCTAA
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| Protein sequence | MRNHHWRICL IVGLLVSLGL WMQPANANKS SDPNRLIEPS MGFEFAQLDQ WIPSIFAENG
PQTNSQVAQR SIGFVHRTTP SLLAIVSSFA NPKALSSSGW IKRYDYRRTN AAYQIETIEW
QKRSVQLISE HQLSRQAHGT PDHLRLIIAI NQQIMVFEYI GYSINRAEFL AWLEQITLIP
AQKFQASPLS NDVKEAFAQA NQPLAVSIQN CCGVSDPEFN PFPCNSSVGN GNCTWWVRYR
RTGNNIANLS NCTGNADTWD ECAASSYPQL LSDTPSVKSA VVWTNINHVA FLEQVNSPTS
ITMSQMNWYS PCPQSTITQG ITNKKFIRHP DAIQPEPAKR WHLSYNLSSG NAELSFNYGL
KSDKAVIGDW NGDGIDTPGV VRGNTWYLSN TYGEPHTISF EFGDPNDIPV VGDWNGDGKD
TPGLVRGTTW YISNNLNGGW AERSFGFGEA GDKPVVGDWN GDGKDSPGVV RGITWYLSNN
LNGGWADISL GFGELGDTFI VGDWDGDGDD TPGVVRGNMW YLSNNLNGGW ANLSFMYGDP
GNYPIVGNWG DSDRNSEIGV IP
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