| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0986 |
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| Symbol | |
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| ID | 5732889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 1130513 |
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| End bp | 1133131 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641278120 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001543762 |
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| Protein GI | 159897515 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.544559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTC TGCAACAATC TGATGCCGAT GCTGTGCCAA CTATCGCCCT AGGCCAACCA
GCTACGCCTT GGCAATTGGC GCTCAATCAG TTTGTAACCT TGGTTGCCAA TGAAAGTTTA
GGTGGCGAAA GCCTGCCCCA CTATTTTAAA CCTTGGCTGA CTCATCTGAC CACTTGGCTG
CTATTTATTC CCACCGATCC GAAAACATTG CTGCAAGGTT TTGTGCTCGG CCAAGCAGAC
CGCTATCAAC TTTTAGCTCA AGCAACCCGT TTGGCCTGGC TGGAACAGTA TTATTTCAGT
GCTCCGCAGG CGCTTTTGGC TCCTCAACGC TTGGCTAAAC CAACTGAATT TGGTTTACCG
CTGCCTAGCA CGAACGAACC TGTGTGGCTG ATTCCTTTGC GAGCCTATGG TCGTTTGTGG
GGCATTGTTG TGCTCGAAGT AGCCGAGGCT AGCCCACCCA GCGAACATCC GCTGTATGTC
ATGGTAGCGC AAGCAATTGC CAATCTCAGC CTGCATTTGG ATGCTCGCTA TGCCCGCGAA
TACGAGGTGC AAGCCTACCA GCGCATGCAG ATGATGAGCG AATCGTCGCA TATTTTGGCT
CACACTGGCT TGAATTTGGA TCGCATGCTC ATGGCGTTGA GTAAGCATTT GTGCCAGCAT
TTTAGCGATG GCTGTATGAT TCAAATCCTG AGTATGAGCC AACCCAGCCA GATTCAGCAA
GAGATTTTTC ATCATCAACA AACCGATTAT CGTACCCAAC TCTATCGAAT GTCGGCAGAA
TGGGCTGATC AACTCGCACC TGATTCGTTA CGCTATCAAG TGCTTATTTC TAATCAACCC
TTAGCATTAA ACATCTATGA GCATCAATTG CTACTTGAAG CAAGCGAATT TCAACCGCTA
TTAGGTGAAT ATAAATTACA CAGTGTGCTA ATGGTTGGTC TCTATTGGAA CGAACATCCA
GTTGGCATAT TAAGTTTATT GCGTACTCAC ATCAATTTGC CATTTATGCA AGAAGATCTT
GAGATTGCGC GTGATATTGG CACCCGTTTT GTTGAAGCAC TCGAACAAAC TCGTTTATAT
GCTGAGTTGC GTGAACAAGA GCAGGCATTA ATGCTGATGG TTCGTCGTTT AGAAGAACAG
GTTGAAGAAC GCACAAATGA GTTATCAAAT AAGAATGTAC AGCTTAATCG TGAACTCGAT
CGGCGACGTA AAACCGAAGA GGCCTTAGTC GAGAGCCAAG CCTTATTGCG TAGTTTTTAT
GCTAGCACTC CCGTAATGAT GGGGGTGGTT GAAATTACGC CTGAGGCTGA TTTAGTCTTG
CTGACTGCTA ATACAATGAC GGTTAAGCAA TGGCAACTTG CAGCTAGCTA TGCTGAAATG
ACGATGAGCC AGCTTGGAAT ACCTCAAGCA GATATTGATC GTTGGATTCA ATATTTTCAA
CGTAGCCGAA CGAAAGGTCA GCCAGAACGC TTTGACTATA ACGATCCATT CGATTCGAAC
ATTATCTATA CTGCGACAAT TGGCCCGGTT AACACCGCTT CACCAATCGG CCAACGTTTT
TGTTTTGTGC TCGAAGATAT CACCGCAAGT CGTAATCTTC AGCAATCGTT GGAAGAAAGT
AAGCATCTTG TTGAGCAAAT TAATGCTTCG ATTCCCTGTA TTGTCTATAA ATATGATGTA
AAGCTCAATC AAATAACCTA TATTAATCGC TCATTAGAAT CAATGCTTGG GTATGGGACA
AACGAAATGC TCGAAATGCA AGAAATGGAT TTACGTAGCT TAATTCATCC TGATGATTTG
ATCCAAATTG ATGCTTATTT GCCAAGTTTA TATACGTCCA AGCCAGGTAC AATTATTCAA
AATCGCTTTC GCATTAAGCA TCGCGATGGC CAATGGCGCT GGATTATTGG CTATGATACC
GTATTTCAAA CTGATGAAAC TGGGTATGCC AGCTCAATTC TATCGGCATT GCAAGATGTC
AGCGAGCTCT ATTCGCATCG TGAACAATTG CAAGCATCAT TGGAAGAAAA AATGGTGCTC
TTGCAAGAAA TTCATCATCG AGTCAAGAAC AATTTGCAAA TTGTTTCAAG CTTGCTCAAT
TTACAAGCTC GCCAAATTAG CGATCCAAAT ACCCGCGATC GTTTTCTCGA AAGCCAAAGC
CGCATTCATG CAATGGCATT AGTCCATGAA CAATTGTATC GTTCATCAGA TTTACGGTAT
ATCGATTTAG CCGAATATAT CAAACACCTT GTGCAATTTT TCCGCCGTTC GCATACGAAT
CGCCCAACAC TTTCAATTAA TATCCAGATT GAGCCAGTCA ATCTGAATAC TGATACAACG
ATTCAGCTAG GATTAATTAT CAATGAACTT CTGACGAATA GTTTCAAACA TGCCTTTGTC
GCCCAAGAGA CCGGCCTGAT TTGGTTGAAG GGCAGCTATG ATCAGCAGTT TGTAGAGCTA
GAAATTGGCG ATGACGGCAT TGGGATGCCA ACTGATCGTC AACCATCCAA CTCGATGGGG
CTTGAATTAG TGCATGCCCT GATTCGCCAA CTTGGTGCCT CGATTCAGCA GCTTTCAACG
GATGGCACTG TGTTTAAGTT AACAATTCCA CGTAAATAA
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| Protein sequence | MSFLQQSDAD AVPTIALGQP ATPWQLALNQ FVTLVANESL GGESLPHYFK PWLTHLTTWL
LFIPTDPKTL LQGFVLGQAD RYQLLAQATR LAWLEQYYFS APQALLAPQR LAKPTEFGLP
LPSTNEPVWL IPLRAYGRLW GIVVLEVAEA SPPSEHPLYV MVAQAIANLS LHLDARYARE
YEVQAYQRMQ MMSESSHILA HTGLNLDRML MALSKHLCQH FSDGCMIQIL SMSQPSQIQQ
EIFHHQQTDY RTQLYRMSAE WADQLAPDSL RYQVLISNQP LALNIYEHQL LLEASEFQPL
LGEYKLHSVL MVGLYWNEHP VGILSLLRTH INLPFMQEDL EIARDIGTRF VEALEQTRLY
AELREQEQAL MLMVRRLEEQ VEERTNELSN KNVQLNRELD RRRKTEEALV ESQALLRSFY
ASTPVMMGVV EITPEADLVL LTANTMTVKQ WQLAASYAEM TMSQLGIPQA DIDRWIQYFQ
RSRTKGQPER FDYNDPFDSN IIYTATIGPV NTASPIGQRF CFVLEDITAS RNLQQSLEES
KHLVEQINAS IPCIVYKYDV KLNQITYINR SLESMLGYGT NEMLEMQEMD LRSLIHPDDL
IQIDAYLPSL YTSKPGTIIQ NRFRIKHRDG QWRWIIGYDT VFQTDETGYA SSILSALQDV
SELYSHREQL QASLEEKMVL LQEIHHRVKN NLQIVSSLLN LQARQISDPN TRDRFLESQS
RIHAMALVHE QLYRSSDLRY IDLAEYIKHL VQFFRRSHTN RPTLSINIQI EPVNLNTDTT
IQLGLIINEL LTNSFKHAFV AQETGLIWLK GSYDQQFVEL EIGDDGIGMP TDRQPSNSMG
LELVHALIRQ LGASIQQLST DGTVFKLTIP RK
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