Gene Haur_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0980 
Symbol 
ID5732881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1122980 
End bp1123897 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content51% 
IMG OID641278112 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001543756 
Protein GI159897509 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATG GGAAACAGCG CTATGCTTTA TTATCAATTG TTGCAGCATG CGTAACGATT 
GGTTTGAAGT TTGGCGCTTA TCTTTTGACC GGATCAATCG GGCTTTTTTC GGATGCGGCG
GAATCGGTTG TCAACCTGAT TGCAGCGATT ATGGCTTTAT GGATGCTGAC GATTGCTATG
CGTCCCCCCG ATCATGACCA TGCCTTTGGC CACTCCAAGG CTGAATATTT TGCCAGCGGC
TTAGAGGGCA TGTTAATTAT GTTGGCTGCT GGCAGCATCA TCTGGACAGC TTGGCCACGC
GTGTTAAATC CAACTCCAAT AACGCGACTT GACCTTGGTT TAGGGCTTTC GATCTTTGCC
ACCGCGATCA ACGGCGGTGT GGCGTGGATC ATTATGCGAG CAGGCAAACG CTTACGCTCG
ATCACCTTGC AAGCCGATGC CCACCACCTA TTTACTGATG TTTGGACGAC GATTGGCGTA
ATTGGCGGAA TTTTACTGAC CAAATTATCG GGCTGGCTGG TGCTTGATCC GCTAATTGCG
ATCGCAGTTG CCCTCCACAT TATCTGGATT GGCTTTCGGA TTTTGCGTGA ATCGGGCTAT
GGTTTGCTTG ATAGTGCCTT GCCCGATGAA GATCAAGCGG TGATTGAAGA TATTCTGTCG
CGCTATCGCC AACGTGGCTT GCAATTCCAT GCTTTGCGCA CGCGGGTTGC TGGGCCGCGC
CGTTTCATTT CATTGCATGT GCTAGTACCA GGCTCGTGGA GTGTCCAAAA AGGCCATGAT
GTCTGCGAAA CGATTGAATT GGCAATTGCC GCCGCCCTAC CCGATAGCCA TGCGATCACC
CACCTTGAGC CACTCGAAGA TCCCGCCGCC TGGGACGACG AAGGCCTTGA TCGGGTCAAT
CACGAGCCAA TCAGTTAG
 
Protein sequence
MFNGKQRYAL LSIVAACVTI GLKFGAYLLT GSIGLFSDAA ESVVNLIAAI MALWMLTIAM 
RPPDHDHAFG HSKAEYFASG LEGMLIMLAA GSIIWTAWPR VLNPTPITRL DLGLGLSIFA
TAINGGVAWI IMRAGKRLRS ITLQADAHHL FTDVWTTIGV IGGILLTKLS GWLVLDPLIA
IAVALHIIWI GFRILRESGY GLLDSALPDE DQAVIEDILS RYRQRGLQFH ALRTRVAGPR
RFISLHVLVP GSWSVQKGHD VCETIELAIA AALPDSHAIT HLEPLEDPAA WDDEGLDRVN
HEPIS