Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0978 |
Symbol | |
ID | 5732879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1121835 |
End bp | 1122230 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641278110 |
Product | thioesterase superfamily protein |
Protein accession | YP_001543754 |
Protein GI | 159897507 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTC AGTATCCACT AGAAGTTCGT TTTCGCGATT TGGATGGGCT TGGGCATGTC AATAATGCGG TCTATTTGAC TTATTTTGAG ACCTTGCGTT TACACTTTGC GCTCGAATTG TTGGGCGTAG CGCATTTGGC TGAAGTGCCG TTTATTTTAG GCGAAATTTC AGTGCGCTTT CTCAAGCCTG TGTTTTTTGG CGATCAACTC CAAGGCAGCG TCGATGTCTC GCGGATTGGG CATAAAAGCT TTACCATGAT TTATACGATT AAGCGGGGCA ACGAAATTGT GACCCAAGGC TCGACCGAAT TAATCTGGTT TGATTACAAA ACTCAACGTT CGGTGCCAAT TCCCGATTCA TTTCGCCAGC AAGTTGCCAG CTATCAACGT GCTTAA
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Protein sequence | MSFQYPLEVR FRDLDGLGHV NNAVYLTYFE TLRLHFALEL LGVAHLAEVP FILGEISVRF LKPVFFGDQL QGSVDVSRIG HKSFTMIYTI KRGNEIVTQG STELIWFDYK TQRSVPIPDS FRQQVASYQR A
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