Gene Haur_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0978 
Symbol 
ID5732879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1121835 
End bp1122230 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID641278110 
Productthioesterase superfamily protein 
Protein accessionYP_001543754 
Protein GI159897507 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTC AGTATCCACT AGAAGTTCGT TTTCGCGATT TGGATGGGCT TGGGCATGTC 
AATAATGCGG TCTATTTGAC TTATTTTGAG ACCTTGCGTT TACACTTTGC GCTCGAATTG
TTGGGCGTAG CGCATTTGGC TGAAGTGCCG TTTATTTTAG GCGAAATTTC AGTGCGCTTT
CTCAAGCCTG TGTTTTTTGG CGATCAACTC CAAGGCAGCG TCGATGTCTC GCGGATTGGG
CATAAAAGCT TTACCATGAT TTATACGATT AAGCGGGGCA ACGAAATTGT GACCCAAGGC
TCGACCGAAT TAATCTGGTT TGATTACAAA ACTCAACGTT CGGTGCCAAT TCCCGATTCA
TTTCGCCAGC AAGTTGCCAG CTATCAACGT GCTTAA
 
Protein sequence
MSFQYPLEVR FRDLDGLGHV NNAVYLTYFE TLRLHFALEL LGVAHLAEVP FILGEISVRF 
LKPVFFGDQL QGSVDVSRIG HKSFTMIYTI KRGNEIVTQG STELIWFDYK TQRSVPIPDS
FRQQVASYQR A