| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0971 |
|---|
| Symbol | |
|---|
| ID | 5732857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1113703 |
|---|
| End bp | 1114557 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641278103 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001543747 |
|---|
| Protein GI | 159897500 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.374881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTT CAGATCTGCT CAAAGACAAA GTGATCATCA TCACTGGTGG GGGTTCGGGC
TTGGGGCGTT CAATGGGTGA GCGCTTCCTG GAGTTGGGGG CAAAGTTGGC AATTACCAGC
CGCAATGCCG AAAAATTAAG CACTGTGGCC AACGAAATGA TGGCAGCCAA AGGCGGCGAG
GTCTTTACCG TGCCCTGCGA TGTGCGCGAC CCCGAAGCAG TTGACCAGAT GATCGAGGCC
GTTTGGAACC ATTTCGGGAC AGTCGATATT TTGGTCAACA ATGCTGCTGG CAACTTTATC
AGCCCAACCG AGAAGCTTTC ACATCGCGCA GTTGATGCTG TTTTGGGGAT TGTGCTGCAT
GGCACGTTCT ACTGCACCTT GGCTTTAGGC AAAAAGTGGA TCGAAGCTGG ACGTGGTGGT
CAATGTTTGA ACATCGTTAC AACCTATGCT TGGTCGGGTA GTGGCTTTGT TGTGCCATCG
GCGGCAGCCA AAGCTGGGGT TTTGGCCCTG ACCCGCTCGT TGGCGGTCGA ATGGGCACGC
TATGGTATTC GCATGAATGC AATCGCACCT GGCCCCTTCC CCACTCAAGG CGCGTGGGAA
CGACTTGCCC CAACCCCCGA ATTGGCCGAA CAAGCACTCA ATCGCGTGCC TTTACGCCGT
GTTGGCGAAC ATATTGAGCT GGCCAATTTG GCCGCCTATA TGTTGGCCGA CGAAGCAGGC
TATATCAACG GCGAATGCAT CACGATTGAT GGCGGCGAGT GGCTGTATGG CGCTGGCCAA
TTCTCAGGGC TTGATCGTTT GCCCAACGAA ATGTGGGATA TGCTCTCCAA AATGACCAAG
AAAAGCGGCA GCTAA
|
|---|
| Protein sequence | MFRSDLLKDK VIIITGGGSG LGRSMGERFL ELGAKLAITS RNAEKLSTVA NEMMAAKGGE
VFTVPCDVRD PEAVDQMIEA VWNHFGTVDI LVNNAAGNFI SPTEKLSHRA VDAVLGIVLH
GTFYCTLALG KKWIEAGRGG QCLNIVTTYA WSGSGFVVPS AAAKAGVLAL TRSLAVEWAR
YGIRMNAIAP GPFPTQGAWE RLAPTPELAE QALNRVPLRR VGEHIELANL AAYMLADEAG
YINGECITID GGEWLYGAGQ FSGLDRLPNE MWDMLSKMTK KSGS
|
|---|
| |