Gene Haur_0969 details

Gene Information

• Locus tag: Haur_0969
• ID: 5732855
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 1111724
• End bp: 1112392
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641278101
• Product: haloacid dehalogenase superfamily protein
• Protein accession: YP_001543745
• Protein GI: 159897498
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG2178] Predicted RNA-binding protein of the translin family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00286401
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTATTG AAACCACCAG CCTCATTAGC GAGTTAGAGG CGATTCATGC CACCCGCGAA 
ATCGCGCTCA AATCGGCTCG CGAACTGATT CGCCAATGTG CCAACACGAT TCGGGCGGTG 
CATCGCCACG AATGGGCTTT GGCCGAACCA CTTTTGCAAG CAACGGCAGC AGCAGCTCAA 
AGCCTACGCG AACGCCTTCA GGATTATCCG GCCTTGCTCT ATGCAGGCTA TACCCAAGAT 
GCCTTTAAAG AATATGCCGA AGCGGCATTA ACCTTGGCCT TGGTGCGCGG CGAAACTCTG 
CCAACCCATC ATGCCTTGGG CGTTGAAGCC GCAGCCTATC TCAATGGTTT GGCCGAGGCC 
GCCAGCGAAT TGCGGCGCTA TATTCTCGAT GGCTTGCGCC ATGGCAAGGT CGATAGCGGC 
GAACGCTTGC TCGACCAGAT GGATGAGATC TATAGCTTTT TGGTGACGGT CGATTTCCCC 
GATGCCGTCA CCAGTGGCTT GCGCCGCACA ACCGACGCGC TGCGAGCTGT ACTCGAACGC 
ACCCGTGGCG ATCTAACCAG CGCTGTGCGC CAAGAACAAT TGGTTGCCGC CCTCGCCCGC 
TTTGAACAGC ATATGGGGCT GCCCCCCGCT GCGCTACAGG AGTCAACGCC CGATGAAACA 
GACAGTTAG 

 

Protein sequence

MSIETTSLIS ELEAIHATRE IALKSARELI RQCANTIRAV HRHEWALAEP LLQATAAAAQ 
SLRERLQDYP ALLYAGYTQD AFKEYAEAAL TLALVRGETL PTHHALGVEA AAYLNGLAEA 
ASELRRYILD GLRHGKVDSG ERLLDQMDEI YSFLVTVDFP DAVTSGLRRT TDALRAVLER 
TRGDLTSAVR QEQLVAALAR FEQHMGLPPA ALQESTPDET DS