| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0949 |
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| Symbol | |
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| ID | 5732835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1088541 |
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| End bp | 1090418 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641278081 |
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| Product | ABC transporter related |
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| Protein accession | YP_001543725 |
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| Protein GI | 159897478 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.128787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGTG GATTAGGCGG TCCCCGCCAC TTACTCGAAG CCGAAGCTCA GAAGCCCCAA
CGCTTAGGTG CGACGCTGGC TCGCTTTGGG TTTTACTTTC GCAAAAAATG GTTTGGCTTT
GCCTTTGCCA TTCTATTAAT TGTTATCGGC ACATGGGGTC AGGTGCTTAC TCCCGATTTG
ATCGGCCAAT CGATCGATTG CTATTTGCTG CCCAACCCCA GCGCCTGCTG GTTTGATACG
ATCAACAGCG AGATTAGCAA TGCTGATCGT TTGAGTGGAC TTGGCTCGTT GGTGCTGTTG
TTGTGTGGCT TGTTCATTGG CACATCGATT TTGCAGGGCT TGGCCTTTTA TGCCATGAAC
TGGTCGGGCC AGCATGCCCT GCGCCAAATG CGCGAAGATC TATTTGCTCA GATTCATCGC
TTGTCGTTGG GTTTTTACTC ACGCAATGAA GCTGGCAACA TTATGAGCCG CATCACCAGC
GATACCGATA CGATTCAGCA GATGCTGGGC TTTGCCTTGC TCAACGTGCT TGGCGGCATT
TTGCTGATCG GCTGGGTTGC CATCAAGATG TTGCAAGAAA ATGTGCCGTA TGCTTTGCTG
AGCTTGAGCG TTGTGCCGTT TATGGCGATT GCAACCTTCT ATTTTTCAAG CCAAGCTCGC
AAAGCCTTCC GCAAAACTCG TCAACAGATG GGTAGCGTCA ACGCTGGCTT GCAAGAAAGC
ATCGCAGGAG CGCGGGAAGT ACAAGCGTTC AATCGCGAAG AAGAAAGCAT CGCCCAATTT
GTGCGTACCA ACGCCGCCAA TCGCGATGCC AACGTGCGGG CCGCCACTTT TACCAGTGCG
CTCAACCCAG TGCTCGAAGC CTTGGGTTAT GTGGCGATTG CGATTGTTGT GGTGGTTGGC
GGGCTTTCAG TGTTGCGCGA TCAACCATTA TTTGGCTCGA CCGCAATTTC CTTGGGCTTG
GTATTTGCCT TTTTGCAATA TGTCCAACGC TTCAACCAAC CAATTCAGCA AATTGCTGTG
ATGTGGACCA ACGTGCAAAA TGCGATTGCT GGCGGCGAAC GGATTTTCAA TTTGCTCGAT
GAAGCTCCCG ATGTGACCGA CAAGCCCGAT GCTCGCGAAA TGCCGGCGAT TGTGGGCAAA
GTTGAGTTGG TTGATGCTAA AGCTGAGTAC AAAAAGGGCG AACCCGTGTT GCGCGGTGTC
AGTTTTACGG CTGAGCCAGG CCAAACAATT GCGATTGTGG GGCCGACTGG AGCTGGTAAA
ACCACAATCA TCAACTTGCT GCCACGTTTT TATGATGTCA CTGGTGGCGC AGTTAAGATT
GATGGAATCG ATGTGCGCGA TGTAACAGCT GCTAGCTTGC GCCGCCAAAT TGGTATCGTG
CTACAAGATT CGTTCTTGTT CTCCGATACG GTGATCAACA ATATTCGCTA TGGGCGGCTC
GATGCCAGCG ATGAAGAAGT GATTGCAGCG GCTAAATTAG CCTCGGCTCA CGATTTTATC
GAGCGTTTGA GTGATGGTTA CCAAACGGTG CTCGGCGAGC GTGGTGGTGG TTTGAGCCAA
GGCCAACGTC AATTAATTTC GATTGCCCGT GCTGCGCTGG CCAATCCACG TATTTTGATT
TTGGATGAAG CGACTTCGAG TGTTGATACT CGTACCGAGC GCTTGATTCA GCAGGCCTTT
GATAGCTTGT TGCAAGGCCG AACCAGCTTT GTGATTGCCC ACCGTTTGAG TACAATTCGC
AACGCCGATT TGGTGTTGAT GCTCAAAGAT GGTGCAGTGA TCGAGCGTGG CACACATACC
GAACTCTTGG CGCAACGGGG CGCATACTAC GATTTGTATA TGAGCCAATT TCGGCGCGAA
GAGGAAGTAG CAGTTTAG
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| Protein sequence | MMGGLGGPRH LLEAEAQKPQ RLGATLARFG FYFRKKWFGF AFAILLIVIG TWGQVLTPDL
IGQSIDCYLL PNPSACWFDT INSEISNADR LSGLGSLVLL LCGLFIGTSI LQGLAFYAMN
WSGQHALRQM REDLFAQIHR LSLGFYSRNE AGNIMSRITS DTDTIQQMLG FALLNVLGGI
LLIGWVAIKM LQENVPYALL SLSVVPFMAI ATFYFSSQAR KAFRKTRQQM GSVNAGLQES
IAGAREVQAF NREEESIAQF VRTNAANRDA NVRAATFTSA LNPVLEALGY VAIAIVVVVG
GLSVLRDQPL FGSTAISLGL VFAFLQYVQR FNQPIQQIAV MWTNVQNAIA GGERIFNLLD
EAPDVTDKPD AREMPAIVGK VELVDAKAEY KKGEPVLRGV SFTAEPGQTI AIVGPTGAGK
TTIINLLPRF YDVTGGAVKI DGIDVRDVTA ASLRRQIGIV LQDSFLFSDT VINNIRYGRL
DASDEEVIAA AKLASAHDFI ERLSDGYQTV LGERGGGLSQ GQRQLISIAR AALANPRILI
LDEATSSVDT RTERLIQQAF DSLLQGRTSF VIAHRLSTIR NADLVLMLKD GAVIERGTHT
ELLAQRGAYY DLYMSQFRRE EEVAV
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