| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0948 |
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| Symbol | |
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| ID | 5732834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1086608 |
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| End bp | 1088536 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641278080 |
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| Product | ABC transporter related |
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| Protein accession | YP_001543724 |
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| Protein GI | 159897477 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.336517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGCAC AAATGGGAAA ACCCCAAGCA CAGCGTGGTC AGAAAGCTGG CGGTGGGTCG
GGGGGGCTTG GTCGTGCGAT CGCCTACCTT GGTGCTCAGC GTAAATCGGC GATTCTGGCC
TATGTGGCCT TGGCACTCGC AACCTTAGCC CAATTGGCAG TGCCGCAATT GGTGCAAAAC
ATGATCGATG CGGTAACCAG CGGCTCAATT GCGCGAATTA TTTTCAAGCA AGTGCCTGAG
CCTATGCAAG CTGCCGCTGC CCAACAAGCG GGCACGACTA TCGAACAATT GCGGCTTGAT
CAAACCAATG CTGAATCGTT GTTGATTAAT GCGGCGTTGA TTATTGTGGC TTTTGCGTTT
ATGCGTGGAA TTTTCTCGTT TGTGCAAGCC TATATGGCTG AAAAAACCTC GCAAGGTGTG
GCGTTTGATC TGCGCAATCA GATTTTTGCG CGGGTGCAAC GCCTTTCATT CTCCTACTAC
GATCAAAATC AAACAGGCCA ATTGATGATT CGCGCTACCG ATGATGTGGA AAAAGTGCGA
ACCTTCATTG CCCAAGGTTT GATTTTAACT GCTCAAGCGT TGTTGCTCTT GGTTGGCGCG
TTGGTGATTT TGTTCTTCAC CAATTGGAAG CTTTCATTAG TGGTTGTACC CTTGTTGCCC
GTCGCCATGG TCATGTTTAT GATCTTTGGC AAGGTCAGTC AGCCTTTGTT TGGGGTGGTG
CAACGCAAAC TTTCGGCGCT TAACACGATT TTGCAAGAAA ACCTAGCGGG GATCAAAGTT
GTCAAGGCGT TTACCCGCGA GCCATATGAA TCGCAACGCT TTGATCTGGC GGCAACCGAT
TTGATGTCGC AACAACTGCG AATTAGCAAA GTCTTTTCGT TTTTGTTTCC GGTAATCTTT
TTGGTGGCCC AACTTGGCCA AGCGGGAATT CTCTATTTCG GCGGTCGCCA AATTTTGGGC
GGCACGCTTG ATTTAGGTGA ATATCAAAAA TTTAGCTTGT ACTTGGTCTA TGTGTTTTTT
CCCTTGGGTC AGCTTGGCTT TATTATCTCG CTGATGGCGC AGGCTGGGGC TTCGGCCTCG
CGGATTTTCG AAATTCTCGA TGCCAAGAGC GAAATTACCG ACAAACCTGA TGCCCAAGAA
TTGCCTGCCA TTCAAGGTAA TGTTGAATTT CGCAATGTAA CCTTCCGCTA CTTTGGTAGC
AGCGATCCAG TGCTTCGTGA TGTGAGTTTC GAGGCCAAAC CAGGCCAAAC CATCGCCTTG
CTCGGCGCAA CTGGTAGCGG CAAATCGACG ATCATCAACT TGCTGCCACG CTTTTACGAT
GTCAGCGAAG GCGCAGTCTT GATCGATGGT CATGATTTGC GCGATGTCAA ACTTGATAGC
TTGCGCTCGC AGATTGGGAT TGTGCTGCAA GAAACCAATC TGTTTAGTGG TTCAATTCGC
GATAACATCG CTTTCGGGCG GCCTGAGGCG ACATTTGAAG AAGTTGAGGC AGCCGCTAAA
GCTGCATCAG CTCACGATTT TATTATGACT TTCCCGCAAG GCTACGATAC CTCGGTTGGC
GAACGTGGTG CAACCTTGTC TGGTGGTCAA AAGCAACGGA TCGCAATTGC CCGCGCTTTG
TTGCTCAATC CACGGCTCTT AATTTTGGAT GATTCGACCA GCAGCGTTGA CTTGATGACT
GAATATCGGA TTCAAAAGGC GCTTGATCAA TTGATGCAAG GCCGCACCAG CGTGGTAATT
GCCCAACGGA TTAGCACCGT TTTGAATGCC GACCAAATTT TGGTGCTCGA AAAAGGCCAA
GTCGTGGCGC GTGGCAACCA TGAAGAATTA ATGGAAAGTA GCGCCATCTA CGCCGAAATT
TACAATTCAC AACTGGTCGG CGATGCCGAC ATTGCAGCGC TTGAAAGCTC AAGCGTTGAG
GAGGCTTAG
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| Protein sequence | MQAQMGKPQA QRGQKAGGGS GGLGRAIAYL GAQRKSAILA YVALALATLA QLAVPQLVQN
MIDAVTSGSI ARIIFKQVPE PMQAAAAQQA GTTIEQLRLD QTNAESLLIN AALIIVAFAF
MRGIFSFVQA YMAEKTSQGV AFDLRNQIFA RVQRLSFSYY DQNQTGQLMI RATDDVEKVR
TFIAQGLILT AQALLLLVGA LVILFFTNWK LSLVVVPLLP VAMVMFMIFG KVSQPLFGVV
QRKLSALNTI LQENLAGIKV VKAFTREPYE SQRFDLAATD LMSQQLRISK VFSFLFPVIF
LVAQLGQAGI LYFGGRQILG GTLDLGEYQK FSLYLVYVFF PLGQLGFIIS LMAQAGASAS
RIFEILDAKS EITDKPDAQE LPAIQGNVEF RNVTFRYFGS SDPVLRDVSF EAKPGQTIAL
LGATGSGKST IINLLPRFYD VSEGAVLIDG HDLRDVKLDS LRSQIGIVLQ ETNLFSGSIR
DNIAFGRPEA TFEEVEAAAK AASAHDFIMT FPQGYDTSVG ERGATLSGGQ KQRIAIARAL
LLNPRLLILD DSTSSVDLMT EYRIQKALDQ LMQGRTSVVI AQRISTVLNA DQILVLEKGQ
VVARGNHEEL MESSAIYAEI YNSQLVGDAD IAALESSSVE EA
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