| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0941 |
|---|
| Symbol | |
|---|
| ID | 5732827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1077755 |
|---|
| End bp | 1078834 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278073 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_001543717 |
|---|
| Protein GI | 159897470 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3889] Predicted solute binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.984882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAA CCAAGCAGCA GCTGCAGCAG GCGATTAATC AGGCCTTGCC TGAACAACAG
CTTAGCTATA GTCAACAACA GGTCATCAAT CAAGCGCTTG AACAACAGCT GGAGCAAGTT
CGCCAGCTTC AGCCAACCCG TGATCGGCGC AAAGCCCCTA AAACCAAACG CCGAATTTGG
CAATGGCAAT GGAGTCGGGC GCAAATTTTT GCATTAATTG TGGCAACTGC TCTTTTATTT
TTTGTTACCT ACGCCACCTT AGCCACATCG GCTCCTAGCG TGCCCCATAA TGCCAGTGTG
CAAATTTTCG ATGGCACAGC CGTGATCAAC AACCTTCGTA CTGGCGCTGA ACGCCGCTTA
AACGCTGGCG ATGTAACCAT TTTAGAGCCA GGCGATACAA TTCAAACTGA AACCGGTCGG
GCATTAATTA CTTATTTCGA TGGCCAAACT ACTACCTTGC AAGCCAACGC TCGCCTAACC
CTTGAAACCA TGGATAGCCA AAATGGCGGC CAACAAATTC GGCTTAAAGT TTGGTTTGGC
CGCACGCTCA ATGGAGTCAA ACGGTTGCTT GGGCCAAATG ATCAGTTCGA AGTTGAAACG
CCATCCTCAG CAGCTTCAGT CCGTGGCACA GAGTTCACTG TCGAATCGCG CAATAATACT
ACCACCTTTT ATGCCACCGA CAAGGGCAAT GTGCAAGTGG CGATGGATGG TCAAACGGTG
TTTGTGCGGG CTGGCGAACA ATTATTGGCC GAGCAATCCA AACCATTGGT GGTTCAGCCC
CAAATCTCGC CAACCAATAC CCCAACCAAC ACGCCAACAC CAACGGCGAC GGCCACGCCA
ACCAATACCC CAACCAACAC GCCAACGCCA ACGGCGACGA CCACGGCCAC GCCAACTGCA
ACGCCAAGCG CAACGCCAAC GGCCACACCA CAGCTTTACA TTACCCAAGC TGGCGATACA
ATCAATGGCA TCGCCCAACG CTTTGGAATC ACCCCTGATG CTTTGGTCAA CGCCAACCCG
ATCATTCGTG ATCGTGATGA GATTCCGATT GGTTTAACTT TGATTATTCC GCAGCCATAG
|
|---|
| Protein sequence | MASTKQQLQQ AINQALPEQQ LSYSQQQVIN QALEQQLEQV RQLQPTRDRR KAPKTKRRIW
QWQWSRAQIF ALIVATALLF FVTYATLATS APSVPHNASV QIFDGTAVIN NLRTGAERRL
NAGDVTILEP GDTIQTETGR ALITYFDGQT TTLQANARLT LETMDSQNGG QQIRLKVWFG
RTLNGVKRLL GPNDQFEVET PSSAASVRGT EFTVESRNNT TTFYATDKGN VQVAMDGQTV
FVRAGEQLLA EQSKPLVVQP QISPTNTPTN TPTPTATATP TNTPTNTPTP TATTTATPTA
TPSATPTATP QLYITQAGDT INGIAQRFGI TPDALVNANP IIRDRDEIPI GLTLIIPQP
|
|---|
| |