| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0938 |
|---|
| Symbol | |
|---|
| ID | 5732824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1073141 |
|---|
| End bp | 1074901 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278070 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543714 |
|---|
| Protein GI | 159897467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000915423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGGC AGCACTTTCG CTATCAACGC CTCGCACTAC TCAGCCTTGT GGCTTTGCTG
GGAGTGTTAG TCACACCAAC CAAAGCCGTC GAAATCCCGC CAACAGGCGC ATCGGTGTAC
CTCCAAACCA ATGGGCCTAC CAATACCTTG AATAACGGTG ATTGGTACAC CAATAGTCTG
GCAGGTGCAG GTAATGGTTA TCATTACTTT ACGGTTGATA TTCCATGTGC TTGGCCGAGC
ACTGAGCCAG TCCATATCGA TATCTTTAGC CCTGAAATGA ATAGTAATGC CCCCCTCAGC
GACGAGATTC GTGGTGGGGT GTACGATAAT ACGCAATTTG AGTTCTATGC TGCTGGCACG
CCGATTGTTG TTCCAGCAAC GCCTGGCCCA GGTGCGGCTG GTAGTTTGAT TCAACAAACC
TTTGTGCCTG CTGGCACGCC TGAGGCATGG TTGCGCTTCT ACACAATTGC CGCACCTGTC
ACTTGTGGTA CGTATGTTTT GCGTTCAGCC ACTTCCGGCA ACGACGAAAA TGGTTGGCGC
TTGCGGGTTG GCCGCGATAA CGACGCTGAT CCCAATAACG CGCCACCAGC CAACACCGAT
AATTTCGATG GTGTAGCTGG TACTGGCGAT GAAATTACCC TTGGGATGCG TCAGGCTTCG
TTCCAACACG ACGCTGGTGC AGCAGATGTT GTCGCCACAT GTTTAACCTT GTATGAATAT
GTTACTCCTG GTCAGCCCAG CGTTAGCTTT AATAATTTTG ATATCGATAA TGTCCGTCGG
GTGCGTTATT ATGCGCCTGG TGATGCGAGC TACACGCCTA TGGGCAATAG CGGTGGCATC
GTGGGCAGCC TTAGCAACGA CCAAATTTGG AATGGCACTG GCGCAACCTT AGCCACCCGC
GTCGGCGATA CGATCAATAA CCCAGTTTCA GGCTGGTGGC GGATCGTAAC CTGTACCAGC
AATCACAATC AGTTTATTCA AGAAGGCCAA ACTGGCACAC CAGCCTACTA CGAACAGCCA
CCAACGCCAG TCATGGCCTT GAGCAAAACC GATGGCGTTA CCTTGGTCTT ACCAGGCGAT
ACGCTGAATT ACACCATCGC CTTTACCAAT ACTTCCAACA GCACGGCCAC GCCAGGTAGT
GCAACCAACG TTACCTTAAC CGACAATTTA CCACCCGACA CGACCTTTGT CAGTTGTGCG
ATTAATCTGC CATTCACTGG TACATGTAAT CATGCTGCTG GTGTGGTGAC CTTCAATATT
ACCCAAATAG TTCGCCCAGG CGAAGTTGGC ACACTCAACG TTCAGGTAAC CGTCAACGAT
CCGATCACCA CGGTTCCGGT GGTCAACAAT GTTACCTTGA CCTTCAACGA TACCTTGAAC
AATGTGTTCC AACCATTGAA CGCCAGCGAT AGCGATTTGG TCAATCCAAC TGCGGTAACT
GTGGTTGGCT TCACGGCCTT GGTACGGGTC GATGATATTC AAGTGCGCTG GAGCACTAGC
CAAGAATTGG AAACCCAAGG CTTCCATATC TATCGGAGCA CCAGTGATGA CCCAGCGACC
GCCGTCCAAG TGACTGAGAA CTTGATTCCA GCCTTGGGTG CGCAAACCAA CTATCAATGG
CTTGACACCA ACGCTGAGCC AAATGTGCAT TATTACTATT GGTTGGTTGA AGTCGATGCC
AACAATAATT TGAGCATGAT CGGCCCAACC GATGCACAAA TCGAGCGCTA CAGCATTTTC
ACTCCCTTCG TTATACGCTA A
|
|---|
| Protein sequence | MGRQHFRYQR LALLSLVALL GVLVTPTKAV EIPPTGASVY LQTNGPTNTL NNGDWYTNSL
AGAGNGYHYF TVDIPCAWPS TEPVHIDIFS PEMNSNAPLS DEIRGGVYDN TQFEFYAAGT
PIVVPATPGP GAAGSLIQQT FVPAGTPEAW LRFYTIAAPV TCGTYVLRSA TSGNDENGWR
LRVGRDNDAD PNNAPPANTD NFDGVAGTGD EITLGMRQAS FQHDAGAADV VATCLTLYEY
VTPGQPSVSF NNFDIDNVRR VRYYAPGDAS YTPMGNSGGI VGSLSNDQIW NGTGATLATR
VGDTINNPVS GWWRIVTCTS NHNQFIQEGQ TGTPAYYEQP PTPVMALSKT DGVTLVLPGD
TLNYTIAFTN TSNSTATPGS ATNVTLTDNL PPDTTFVSCA INLPFTGTCN HAAGVVTFNI
TQIVRPGEVG TLNVQVTVND PITTVPVVNN VTLTFNDTLN NVFQPLNASD SDLVNPTAVT
VVGFTALVRV DDIQVRWSTS QELETQGFHI YRSTSDDPAT AVQVTENLIP ALGAQTNYQW
LDTNAEPNVH YYYWLVEVDA NNNLSMIGPT DAQIERYSIF TPFVIR
|
|---|
| |