| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0909 |
|---|
| Symbol | |
|---|
| ID | 5732810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1040964 |
|---|
| End bp | 1043405 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641278041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543685 |
|---|
| Protein GI | 159897438 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTGG GTTTTACCTT TAATTATGCT TGGCGCTCGT TACGCTTGGG TGGTCAGCGC
ACGCTGTTGG CAATTATCTG TATTGGCTTT GGCGTGATGT CGCTTGGCTC GATGCAAAGT
TTATCGACGG CGATCAATCA AATTTTTATT GAAAATCGGG TTAGTGTTGG CGGCGATGCC
ATGCTCGATT GGCCTAACGG CTCAATTGGC CCTGAACAAC AAGCCCAACT TGAACAATGG
AAACAAGCAG GCGTGATTGG CGGCTATGTG GTTTATTCGG CAATTCCGCC TGGGTTGCTC
AAGCCTGCTG GCGGCGATCA TGTGATTTTT GGTGATATTG GCTATGGGAT TGATCCACAG
AGCTACCCGT TGTTGGGCGA ATTGCATGTG AGCCAACCCG CCAACGCCAG CATGAGCGAG
TTGCTGAGCC AGCCCGATGC CTTGGTGGCT ACTGAGCTTT TGGCAATTCA GCATGATCTG
ACGATTGGCC AAGAACTGGT GATTTTGGTT GATCAAGGGG CAACGCCGAA ACGCCTGAAA
TTGGTTGGTT TGGTGGATCA AGTGCCGAAC AAGAGCGCTG GTAGCTTATT TTTTAGCCTG
GCGACGGCCC ACGAAATTTA CCCTGAAGCC AATTTGAACT CAGTGAGGGT GGTTTGGGGC
CAGCAAGGTG TGCAAGTTGG CGTGCTAGAG CAAGCTGGTT GGTCGGTTGC CACCGTCAGT
AGCGAGCCAT CGGATGCCGC TGGTTTATTC AATATGACCT TGCGCGGTGC TGGCGTGTTG
GGCTTGATCG TCAGCGGAAT TGGCGTGGCC AATACCATGC AAGTTGTGCT TGCACGTCGC
CGCAACGAAA TCGCCATCCT CAAAACCTTA GGCTATCGTG GCCCACAATT GTTGTTGCTG
TTTGGCTTTG AAACGGCGTT GCTTGGACTG ATTGGCAGTA TCTTGGGTGC TGTGGCCGCC
GTATTAATTG GCGATCAACT CACCGATTTG TTTGCACGTA GCAGCGCCTA CATCCTACCA
ACCGTCGTCG ATTGGCAAAT TTTGGGTGGG GCAATTGGCT TGGGCATCGC CACAACCTTG
ATCTTTGGCA TGGTGGCGAT TGTAAAAGCC AATGCGGTAC GACCTGGCTC GTTGCTACGT
TCTGGCCCGA TCGAAGTTAA CCCGACGACC CGCCGCGCCA TGGTTGGGTT GTATACAGCC
CTAGGGGCCA TGTTTGCCGT GGTTGCTAGC ATTAGCATGG GTTCGTTTGT TGCGGGCATG
CTCTTGTTTG CGGGAGCGGT GTTGGGCTTG GCGTTGCTCA ATTGGCTGTT TCAAGCGATT
TTGTTGTTGG TTGCCAAAAC GCCGTTGCCT GGCTATTGGC TGCGTTTGGC CAGTCGCAAT
ATGCAACGCA ATGGTCAGCG GGCTGCCTTT GCAATTATCG CCTTGGCGAT CGGGGTGTTT
ACGATTGGCT TTTCGGCAGC AGCCTTATTG ACGGTCCAAA AAGAACTTGA TGCCCGCGCC
GATCCAAATA CCAATCTCAA TCGGGCGATG TGGGTGATTA CTGCCCCCAG CGAGGCCTCC
AAGGTTGCCC AAACCTTGCA ACAGTTGCAG CAACCAACGC TTGAGCCAAT TCAATTGTTG
GAAGTTGAGA CTTCGTTGCC CGAGCTTGAA GGCGTGAAAT TTGAAACCTC GGCCCGCTCA
GCCACGCAAA TCGGCGATAT TCAGCTGACC GAAGGCCAAT GGCAGGCTGC GGCTGATCAA
GTGATGTTTT CAACATGGTT TTTCAGCGAA ATTCCGCTTG GCACTGAGCT AGAATTGATT
GGATCGAACG GTCGATTAAA CGTTCGCTTG GTTGGGCGCT ACGAAAATCA AGCTAGCCAA
GCATCGAGCG CCATTGTGAT TGGCCCTGAC GCTGTGTCGC AATTGGTTGC ACAACCTGTT
ACGCTGATTT ATGTGCTCAA TCTGCCGATT AACCAATTGA GCACTGCGAC CAACACGTTT
AATCAGGCGA TTCCCCAAGC CTTTGTTTAT AACGAAGTTG AAATGTATAA CACTACTCAA
ATGATCTATC GCTCGTTAGG CTTGTTTGTG GTGGCGGTGG CTGGCTTGGC GTTTGTGGCG
GGCATGGTGC TGATCGCCAA TGCCGTTGGT TTGGCATTGT TTGAACGTCG CCGCGAGATG
GGCATTTTCA AGGCGGTTGG CTATAGCACT GCGCACTTAT TGCGCAGCAT CAGCATGGAA
TATAGCTTGG TCGGCTTGAT TGCTGGTAGC GCTGGTATGC TGGCAGTTTG GCTTGCGATC
ACAGTGATTA ATACGCTTGA ACCCAAGGCT GGGCTTGGGC TAGATGCCTT GCCAGGTTTG
CTGATTTTTG GCTTTGCAAT CGGCCTAGCG CTGTTGACTG CCTTGGGGGT TGCTTGGCGA
CCCGCCCATC TGCGCCCGCT GCATGTGCTG CGCGACGAAT AA
|
|---|
| Protein sequence | MGLGFTFNYA WRSLRLGGQR TLLAIICIGF GVMSLGSMQS LSTAINQIFI ENRVSVGGDA
MLDWPNGSIG PEQQAQLEQW KQAGVIGGYV VYSAIPPGLL KPAGGDHVIF GDIGYGIDPQ
SYPLLGELHV SQPANASMSE LLSQPDALVA TELLAIQHDL TIGQELVILV DQGATPKRLK
LVGLVDQVPN KSAGSLFFSL ATAHEIYPEA NLNSVRVVWG QQGVQVGVLE QAGWSVATVS
SEPSDAAGLF NMTLRGAGVL GLIVSGIGVA NTMQVVLARR RNEIAILKTL GYRGPQLLLL
FGFETALLGL IGSILGAVAA VLIGDQLTDL FARSSAYILP TVVDWQILGG AIGLGIATTL
IFGMVAIVKA NAVRPGSLLR SGPIEVNPTT RRAMVGLYTA LGAMFAVVAS ISMGSFVAGM
LLFAGAVLGL ALLNWLFQAI LLLVAKTPLP GYWLRLASRN MQRNGQRAAF AIIALAIGVF
TIGFSAAALL TVQKELDARA DPNTNLNRAM WVITAPSEAS KVAQTLQQLQ QPTLEPIQLL
EVETSLPELE GVKFETSARS ATQIGDIQLT EGQWQAAADQ VMFSTWFFSE IPLGTELELI
GSNGRLNVRL VGRYENQASQ ASSAIVIGPD AVSQLVAQPV TLIYVLNLPI NQLSTATNTF
NQAIPQAFVY NEVEMYNTTQ MIYRSLGLFV VAVAGLAFVA GMVLIANAVG LALFERRREM
GIFKAVGYST AHLLRSISME YSLVGLIAGS AGMLAVWLAI TVINTLEPKA GLGLDALPGL
LIFGFAIGLA LLTALGVAWR PAHLRPLHVL RDE
|
|---|
| |