Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0901 |
Symbol | |
ID | 5732802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1033456 |
End bp | 1034151 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278033 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_001543677 |
Protein GI | 159897430 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATC CAGCTCAATT TCAAGTGTTG ACCTTTGATT GTTATGGCAC ATTGATCGAT TGGGAAACTG GTTTGTGGGC GGCGCTTGAG CCAATTTTTG CTCGCTACAA TATCAACATC GAGCAAGAAG CGGCTTTGCA ATTGTATGGC GAGCTAGAAA GTGCGCTCGA AGCAGGCCCA TATTTGGCCT ATAAAACGGT GGTAGCAACC GTATTAGGGC AACTTGGTCA GCGCTTGGGC TTCACGCCAA CCGCCGAAGA ATGTGCTGAA TTTGGCTTGT CGGTCAAGCA ATGGCCAGCT TTTACCGACT CGCCAGCAGC CTTGCAACGC TTGCAACAAC GCTATAAATT GGCGATCATC TCAAATGTTG ATGATGATTT GTTTGCGGCT TCGGAGCAAC GCTTGGGCCT GAAATTCGAT TGGATTATTA CGGCGCAACA GGTGCAATCG TACAAGCCGT CGTTGAATAA TTTTCAGCGA GCCTTTGAAC GTTTAGCCTT GCCGCAAAGC GCAATTTTGC ATGTGGCCCA AAGTTTGTTT CACGATATTG TGCCAGCCAA TCAACTTGGC TTGAACACGG TTTGGGTCAA TCGTCGCCAT TCTAACCCTG GTTTTGGGGC AACGCCTGCC GCCGAAGCCC AGCCCGATTT GGTTGTGCCA AGTTTGGCCG CCTTGGCTGA TGCCTTGGGT TGCTAA
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Protein sequence | MLNPAQFQVL TFDCYGTLID WETGLWAALE PIFARYNINI EQEAALQLYG ELESALEAGP YLAYKTVVAT VLGQLGQRLG FTPTAEECAE FGLSVKQWPA FTDSPAALQR LQQRYKLAII SNVDDDLFAA SEQRLGLKFD WIITAQQVQS YKPSLNNFQR AFERLALPQS AILHVAQSLF HDIVPANQLG LNTVWVNRRH SNPGFGATPA AEAQPDLVVP SLAALADALG C
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