Gene Haur_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0901 
Symbol 
ID5732802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1033456 
End bp1034151 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content50% 
IMG OID641278033 
Producthaloacid dehalogenase, type II 
Protein accessionYP_001543677 
Protein GI159897430 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATC CAGCTCAATT TCAAGTGTTG ACCTTTGATT GTTATGGCAC ATTGATCGAT 
TGGGAAACTG GTTTGTGGGC GGCGCTTGAG CCAATTTTTG CTCGCTACAA TATCAACATC
GAGCAAGAAG CGGCTTTGCA ATTGTATGGC GAGCTAGAAA GTGCGCTCGA AGCAGGCCCA
TATTTGGCCT ATAAAACGGT GGTAGCAACC GTATTAGGGC AACTTGGTCA GCGCTTGGGC
TTCACGCCAA CCGCCGAAGA ATGTGCTGAA TTTGGCTTGT CGGTCAAGCA ATGGCCAGCT
TTTACCGACT CGCCAGCAGC CTTGCAACGC TTGCAACAAC GCTATAAATT GGCGATCATC
TCAAATGTTG ATGATGATTT GTTTGCGGCT TCGGAGCAAC GCTTGGGCCT GAAATTCGAT
TGGATTATTA CGGCGCAACA GGTGCAATCG TACAAGCCGT CGTTGAATAA TTTTCAGCGA
GCCTTTGAAC GTTTAGCCTT GCCGCAAAGC GCAATTTTGC ATGTGGCCCA AAGTTTGTTT
CACGATATTG TGCCAGCCAA TCAACTTGGC TTGAACACGG TTTGGGTCAA TCGTCGCCAT
TCTAACCCTG GTTTTGGGGC AACGCCTGCC GCCGAAGCCC AGCCCGATTT GGTTGTGCCA
AGTTTGGCCG CCTTGGCTGA TGCCTTGGGT TGCTAA
 
Protein sequence
MLNPAQFQVL TFDCYGTLID WETGLWAALE PIFARYNINI EQEAALQLYG ELESALEAGP 
YLAYKTVVAT VLGQLGQRLG FTPTAEECAE FGLSVKQWPA FTDSPAALQR LQQRYKLAII
SNVDDDLFAA SEQRLGLKFD WIITAQQVQS YKPSLNNFQR AFERLALPQS AILHVAQSLF
HDIVPANQLG LNTVWVNRRH SNPGFGATPA AEAQPDLVVP SLAALADALG C