Gene Haur_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0884 
Symbol 
ID5732785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp1008017 
End bp1010488 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content52% 
IMG OID641278016 
ProductBeta-mannosidase 
Protein accessionYP_001543660 
Protein GI159897413 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGC TCGCATTGCA GCAGGCATGG CAGGCCAAAC AACGTGATCC ACAACGCACT 
GTGCTCGCTG ATAGTACGAG TAGCGAAGGC TGGATTGCCG CGCCTGTGCC TGGCACAATT
TACGAAGCCT TGATCGCCGC CGAGCGCATT CCCGATCCCT TCGATGGCTT GAATGAGCTG
GCGGTGCAAT GGGTAGCTGA GGTCGATTGG CTCTATCGTT GCGATTTTGA ATTAACCGCT
GAGCAAGCCA ACCAACCAGC CGCCTTGCAC TTCGCAGGCT TGGATACGAT CGCCACGGTT
TGGATCAATG GCCAAGAAAT ATTAAACAGC GACAATATGT TCGTGCCGCA ACGGGTGGTG
GTCAGTAACC AAATCCACGT TGGCGCAAAT CAATTGCTGA TCGAATTTCG CTCGGCGTTG
AAGCATGGCC ATGCCTTGCA AGCCGAAATG GGACAACTTG GTGTGTGGAA CGGCGATCCC
AGCCGCTTGT ATCTGCGCAA AGCCCAATAT CATTATGGCT GGGATTGGGG TCCAGCCCTG
TTGACGGCTG GCCCGTGGCT GCCCGTCACC CTCGAATTGG GCGCAACTCG TTTGAGCGAT
TTGGCTTGTC CAATCAGTGT AGCTGATGAT TGTAGCACTG CGATTTTTGC GGTAACTGCA
ACCGTTGCGG ATGTACAGGC CGATACTGCG GTATTAATTC AATTATGGAA CCCAGCAGGC
GAGTTAATCG CTGAACACCA ACAATTGGTT GTTGCTGGCA ATATCCAGCA TTCAATCACG
GTTGATCAGC CCAGCTTATG GTGGCCGCAT GGCTATGGTC AGCAACATCG CTATCGCTTG
GCAGTCAAGG TCTTTGCTAA TCAAACGGTG CTCGATCAAC AAGAATTACA GCTTGGCGTG
CGGCGCGTGC GTTTGGTGCA AGAGCCATTG CTCGATGAAG CAGGCGAAAC ATTTTTGTTT
GAAATCAACA ATGTGCCAAT GTTTAGCGGC GGAGCCAATT GGATTCCCGC TGATCTACTG
ACCAATCGTG TAAGCAACGA GCACTATCGC CGCTTGTTGC AGGCAGCGGT TGATAGCCAT
ATGCTGATGA TTCGGATTTG GGGCGGCGGA ATCTACGAAG TTGACCATTT TTATGATCTT
TGCGATCAGC TAGGCTTGTT GGTTTGGCAA GATTTTATGT TTGCCTGCGG CATGTATCCA
GCTCATCCTG CATTTTTGGC CAGCGTCGAG GCCGAAGCAA TCGCCCAAGT TCAGCGCTTG
CGCCATCATC CCTCGATTGT GCTGTGGTGT GGCAACAACG AAGATTACCA AATTGCCCAA
ACCTTCAACG CCTATGATCA CAGTTTCCAA GGCGATTTTA CCAAAACCAG CTTTCCGGCC
CGCGAAATTT ACGAACGCTT GTTGCCCAAG GTCTGTGCCA GTTACGATCC GACCACAATT
TATTGGCCTG GCAGCCCGTA TGGCGGAGCC GATGTCTATG ATAAAACCCG TGGCGACCGC
CATACCTGGG ATGTTTGGCA TAGCGCGATG GCTCCCTACC AAGATTACCC CAAGTACGAA
GGGCGTTTTG TCAGCGAGTT TGGCATGGAA TCGTGCGCAG CGTTGCCAAC CTTGCTGAGC
GTCATTCCTG AGCACGAGCG CTATCCCCAA AGCCGCACGG TCGAGCACCA CAACAAATCG
GAGGGTGGCG CACGCCGTTT GGCGGTGTAT CTCAACGATA CCTTACGATT TGAAAACACC
CTCGAATCGT ATGTGTATGC CACCCAATTG ATGCAGGCCG AGGCTTTGGC GGCAGCCTAT
CGTGGCTGGA GGCGACGTTG GGGTGGCGCA GGCCGTTATG CAGTGGCAGG CGCTTTAGTG
TGGCAACTTA ACGATTGTTG GCCAGTGATT AGCTGGGCCA TTATCGATTC AGCTTTGCGC
AAAAAACCCG CCATCTATAG CATTGGCCGC GAGCTAGCCC CCATCAGCGC CGGATTACAG
CGCAATGGCG CAACAATCGA GGCTTGGGTG GTCAATGGCA CAATTGAATC AAAATCAGCA
ACGATTCAAT TGACTGGCTA CGATTTGCAT GGCAGATTAC TTTTTGAGCA AAACATTGAA
TATGAATTAG CCGCCAATCA AGCCAACCCA ATTCCCAGCC CAAACCTAAA CTTGCCCGAA
CAAAGCGTAG TTGGCATGCA AGTGCTGGTT GATGGTGTGG TTGTGGCAAG AGCCAGCGCA
TGGCCCGAGC CATTCAAATA TCTCCCAGCC TATGATCCCC AAATTAGCGT CACCCGCATG
GCCGACGATT GGCTAGAAAT TAGCAGCCAA CACCCAGCCA AAGGGGTTTG GCTACAAACG
GAGGCTGAAA TCAATTGGAG CGATAATCTG CTTGATCTCT TGCCCAACCA ACCACAACGG
ATTCAAGCAT GTGGCTTAGG TCAACAGCCG ATTGACATTA AGTGGCTGCA CTGGGATCAA
GCAAGAACAT AG
 
Protein sequence
MQKLALQQAW QAKQRDPQRT VLADSTSSEG WIAAPVPGTI YEALIAAERI PDPFDGLNEL 
AVQWVAEVDW LYRCDFELTA EQANQPAALH FAGLDTIATV WINGQEILNS DNMFVPQRVV
VSNQIHVGAN QLLIEFRSAL KHGHALQAEM GQLGVWNGDP SRLYLRKAQY HYGWDWGPAL
LTAGPWLPVT LELGATRLSD LACPISVADD CSTAIFAVTA TVADVQADTA VLIQLWNPAG
ELIAEHQQLV VAGNIQHSIT VDQPSLWWPH GYGQQHRYRL AVKVFANQTV LDQQELQLGV
RRVRLVQEPL LDEAGETFLF EINNVPMFSG GANWIPADLL TNRVSNEHYR RLLQAAVDSH
MLMIRIWGGG IYEVDHFYDL CDQLGLLVWQ DFMFACGMYP AHPAFLASVE AEAIAQVQRL
RHHPSIVLWC GNNEDYQIAQ TFNAYDHSFQ GDFTKTSFPA REIYERLLPK VCASYDPTTI
YWPGSPYGGA DVYDKTRGDR HTWDVWHSAM APYQDYPKYE GRFVSEFGME SCAALPTLLS
VIPEHERYPQ SRTVEHHNKS EGGARRLAVY LNDTLRFENT LESYVYATQL MQAEALAAAY
RGWRRRWGGA GRYAVAGALV WQLNDCWPVI SWAIIDSALR KKPAIYSIGR ELAPISAGLQ
RNGATIEAWV VNGTIESKSA TIQLTGYDLH GRLLFEQNIE YELAANQANP IPSPNLNLPE
QSVVGMQVLV DGVVVARASA WPEPFKYLPA YDPQISVTRM ADDWLEISSQ HPAKGVWLQT
EAEINWSDNL LDLLPNQPQR IQACGLGQQP IDIKWLHWDQ ART