Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0884 |
Symbol | |
ID | 5732785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1008017 |
End bp | 1010488 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641278016 |
Product | Beta-mannosidase |
Protein accession | YP_001543660 |
Protein GI | 159897413 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGC TCGCATTGCA GCAGGCATGG CAGGCCAAAC AACGTGATCC ACAACGCACT GTGCTCGCTG ATAGTACGAG TAGCGAAGGC TGGATTGCCG CGCCTGTGCC TGGCACAATT TACGAAGCCT TGATCGCCGC CGAGCGCATT CCCGATCCCT TCGATGGCTT GAATGAGCTG GCGGTGCAAT GGGTAGCTGA GGTCGATTGG CTCTATCGTT GCGATTTTGA ATTAACCGCT GAGCAAGCCA ACCAACCAGC CGCCTTGCAC TTCGCAGGCT TGGATACGAT CGCCACGGTT TGGATCAATG GCCAAGAAAT ATTAAACAGC GACAATATGT TCGTGCCGCA ACGGGTGGTG GTCAGTAACC AAATCCACGT TGGCGCAAAT CAATTGCTGA TCGAATTTCG CTCGGCGTTG AAGCATGGCC ATGCCTTGCA AGCCGAAATG GGACAACTTG GTGTGTGGAA CGGCGATCCC AGCCGCTTGT ATCTGCGCAA AGCCCAATAT CATTATGGCT GGGATTGGGG TCCAGCCCTG TTGACGGCTG GCCCGTGGCT GCCCGTCACC CTCGAATTGG GCGCAACTCG TTTGAGCGAT TTGGCTTGTC CAATCAGTGT AGCTGATGAT TGTAGCACTG CGATTTTTGC GGTAACTGCA ACCGTTGCGG ATGTACAGGC CGATACTGCG GTATTAATTC AATTATGGAA CCCAGCAGGC GAGTTAATCG CTGAACACCA ACAATTGGTT GTTGCTGGCA ATATCCAGCA TTCAATCACG GTTGATCAGC CCAGCTTATG GTGGCCGCAT GGCTATGGTC AGCAACATCG CTATCGCTTG GCAGTCAAGG TCTTTGCTAA TCAAACGGTG CTCGATCAAC AAGAATTACA GCTTGGCGTG CGGCGCGTGC GTTTGGTGCA AGAGCCATTG CTCGATGAAG CAGGCGAAAC ATTTTTGTTT GAAATCAACA ATGTGCCAAT GTTTAGCGGC GGAGCCAATT GGATTCCCGC TGATCTACTG ACCAATCGTG TAAGCAACGA GCACTATCGC CGCTTGTTGC AGGCAGCGGT TGATAGCCAT ATGCTGATGA TTCGGATTTG GGGCGGCGGA ATCTACGAAG TTGACCATTT TTATGATCTT TGCGATCAGC TAGGCTTGTT GGTTTGGCAA GATTTTATGT TTGCCTGCGG CATGTATCCA GCTCATCCTG CATTTTTGGC CAGCGTCGAG GCCGAAGCAA TCGCCCAAGT TCAGCGCTTG CGCCATCATC CCTCGATTGT GCTGTGGTGT GGCAACAACG AAGATTACCA AATTGCCCAA ACCTTCAACG CCTATGATCA CAGTTTCCAA GGCGATTTTA CCAAAACCAG CTTTCCGGCC CGCGAAATTT ACGAACGCTT GTTGCCCAAG GTCTGTGCCA GTTACGATCC GACCACAATT TATTGGCCTG GCAGCCCGTA TGGCGGAGCC GATGTCTATG ATAAAACCCG TGGCGACCGC CATACCTGGG ATGTTTGGCA TAGCGCGATG GCTCCCTACC AAGATTACCC CAAGTACGAA GGGCGTTTTG TCAGCGAGTT TGGCATGGAA TCGTGCGCAG CGTTGCCAAC CTTGCTGAGC GTCATTCCTG AGCACGAGCG CTATCCCCAA AGCCGCACGG TCGAGCACCA CAACAAATCG GAGGGTGGCG CACGCCGTTT GGCGGTGTAT CTCAACGATA CCTTACGATT TGAAAACACC CTCGAATCGT ATGTGTATGC CACCCAATTG ATGCAGGCCG AGGCTTTGGC GGCAGCCTAT CGTGGCTGGA GGCGACGTTG GGGTGGCGCA GGCCGTTATG CAGTGGCAGG CGCTTTAGTG TGGCAACTTA ACGATTGTTG GCCAGTGATT AGCTGGGCCA TTATCGATTC AGCTTTGCGC AAAAAACCCG CCATCTATAG CATTGGCCGC GAGCTAGCCC CCATCAGCGC CGGATTACAG CGCAATGGCG CAACAATCGA GGCTTGGGTG GTCAATGGCA CAATTGAATC AAAATCAGCA ACGATTCAAT TGACTGGCTA CGATTTGCAT GGCAGATTAC TTTTTGAGCA AAACATTGAA TATGAATTAG CCGCCAATCA AGCCAACCCA ATTCCCAGCC CAAACCTAAA CTTGCCCGAA CAAAGCGTAG TTGGCATGCA AGTGCTGGTT GATGGTGTGG TTGTGGCAAG AGCCAGCGCA TGGCCCGAGC CATTCAAATA TCTCCCAGCC TATGATCCCC AAATTAGCGT CACCCGCATG GCCGACGATT GGCTAGAAAT TAGCAGCCAA CACCCAGCCA AAGGGGTTTG GCTACAAACG GAGGCTGAAA TCAATTGGAG CGATAATCTG CTTGATCTCT TGCCCAACCA ACCACAACGG ATTCAAGCAT GTGGCTTAGG TCAACAGCCG ATTGACATTA AGTGGCTGCA CTGGGATCAA GCAAGAACAT AG
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Protein sequence | MQKLALQQAW QAKQRDPQRT VLADSTSSEG WIAAPVPGTI YEALIAAERI PDPFDGLNEL AVQWVAEVDW LYRCDFELTA EQANQPAALH FAGLDTIATV WINGQEILNS DNMFVPQRVV VSNQIHVGAN QLLIEFRSAL KHGHALQAEM GQLGVWNGDP SRLYLRKAQY HYGWDWGPAL LTAGPWLPVT LELGATRLSD LACPISVADD CSTAIFAVTA TVADVQADTA VLIQLWNPAG ELIAEHQQLV VAGNIQHSIT VDQPSLWWPH GYGQQHRYRL AVKVFANQTV LDQQELQLGV RRVRLVQEPL LDEAGETFLF EINNVPMFSG GANWIPADLL TNRVSNEHYR RLLQAAVDSH MLMIRIWGGG IYEVDHFYDL CDQLGLLVWQ DFMFACGMYP AHPAFLASVE AEAIAQVQRL RHHPSIVLWC GNNEDYQIAQ TFNAYDHSFQ GDFTKTSFPA REIYERLLPK VCASYDPTTI YWPGSPYGGA DVYDKTRGDR HTWDVWHSAM APYQDYPKYE GRFVSEFGME SCAALPTLLS VIPEHERYPQ SRTVEHHNKS EGGARRLAVY LNDTLRFENT LESYVYATQL MQAEALAAAY RGWRRRWGGA GRYAVAGALV WQLNDCWPVI SWAIIDSALR KKPAIYSIGR ELAPISAGLQ RNGATIEAWV VNGTIESKSA TIQLTGYDLH GRLLFEQNIE YELAANQANP IPSPNLNLPE QSVVGMQVLV DGVVVARASA WPEPFKYLPA YDPQISVTRM ADDWLEISSQ HPAKGVWLQT EAEINWSDNL LDLLPNQPQR IQACGLGQQP IDIKWLHWDQ ART
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