| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0854 |
|---|
| Symbol | |
|---|
| ID | 5732755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 966182 |
|---|
| End bp | 967441 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277986 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543630 |
|---|
| Protein GI | 159897383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0320102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTC GTGAATGTCC TAATTGTCGG GCAAGTGTAG ATGATGTAAA TCCGTTTTGT
TCTGAGTGTG GAACCCGGCT CAACGCTGCG CCAACGGCTG CCGAAGGGCC AACTCAAGCC
TTGCCGCGCT ACGATGGTCA GGGCGGCAGT TTTCCACCAC CAGAACAAAA TTATGGTCAA
GCTGGTAGCT ATCCACCGCC ACCACAACAA AATTATGGTC AAGGCGGTAG CTATCCACCA
CAGCAAAATT ATGGTCAAGC TGGCAGCTAC CCACCACCAC CGCAACAAAA TTACGGTCAA
GGCGGTAGTT ATCCACCGCC ACCACAACAA AATCATGGTC AAGCTGGTAG CTACCCACCA
CCACCGCAAC AAAATTATGG CAATCAGCAA CCGTACACGC CCGCCAACTA TCAACAACCA
AATTATGGCG CGGCCTATCC CAATGCCAGC GTACCGACCA AACGCAGCAA TAACACCGGA
ATTGTAATCG GGATTGTCGT GGGGATTCTG GTGCTGATCG GGGCAGGCGT AGCCTTTTTG
ATGGATGGCG ATAATGACGA TCCAAATAAT AAAGTCGTCG CAGGCAATGC GACCAGCGTC
GCCACCGCCA CTGCACGCCC AACCCGCACC CCAGCGGCAG AAGCAACCGA GGAGCCAATT
CCACCAACTG AAGAGCCGAG CACTGGTGGC TTAGCCTTCT TGGAAGACGA TTTTTCGACC
ACCGATGAAG CTTGGCCCGA TCAAGAAACT GCCAGCAAAT CGGGCAAATA TGCCTATGTC
GAAGATGCCT ACCAAATTCA TGTGTATGTC AATGAACGCA TCATCTGGAC ATCGACCAAC
GAAACATATA GCGATGTTGA TGCCCAAATT GATGTAAAAA TGGTCAGCGG CGACCCAACC
AATGCAGCCG GCCTTGTGCT ACGTGAGCAA ATCGATGGCG CTGCTTCAGG CAGTTTGTAT
GTCTACCAAA TCGATGGTCA AGGCAATATT GCCTTCCGTC GCTACGACAA ACAAACCGAA
GAATGGACTA ACCTCGTCGA TTGGAAATTC AGCTCAGTTG CCAATGATGG GATTGGCGCA
ACCAATCGGC TGCGCGTGGT GGCGGTTGGC TCGAACTTTA CCTTCTATTT GAATGGTGAA
AAAGTTGCCA CCTACAACGA TGATACCTAT GCCAACGGCG CGGTGGGCTT CGGCGCAAGC
ACCTTTGATA ATGGTGATAC CTTAACCGAA TTTGATAATT TACGCATGGC TTATCCCTAG
|
|---|
| Protein sequence | MALRECPNCR ASVDDVNPFC SECGTRLNAA PTAAEGPTQA LPRYDGQGGS FPPPEQNYGQ
AGSYPPPPQQ NYGQGGSYPP QQNYGQAGSY PPPPQQNYGQ GGSYPPPPQQ NHGQAGSYPP
PPQQNYGNQQ PYTPANYQQP NYGAAYPNAS VPTKRSNNTG IVIGIVVGIL VLIGAGVAFL
MDGDNDDPNN KVVAGNATSV ATATARPTRT PAAEATEEPI PPTEEPSTGG LAFLEDDFST
TDEAWPDQET ASKSGKYAYV EDAYQIHVYV NERIIWTSTN ETYSDVDAQI DVKMVSGDPT
NAAGLVLREQ IDGAASGSLY VYQIDGQGNI AFRRYDKQTE EWTNLVDWKF SSVANDGIGA
TNRLRVVAVG SNFTFYLNGE KVATYNDDTY ANGAVGFGAS TFDNGDTLTE FDNLRMAYP
|
|---|
| |