| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0810 |
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| Symbol | |
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| ID | 5732710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 917439 |
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| End bp | 919460 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641277941 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001543586 |
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| Protein GI | 159897339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTGT CAGAGCAGAC GGTTGCCCGC GCCGCAAGCT TGCGCGATGA ATTGAATCTA
TACAATCATC ATTATTATAC GCTTGATGCA CCGCTGGTCA GCGATGCTCA ATACGATAGT
TTATTAAATG AATTGCGGGC GATTGAGGCC GAATATCCCG AATTACGCAC CCCCGATTCG
CCGACCCAAC GGGTTGGTAG TGCTCCGTTG AGCAAATTTC CCAAAGTGCA GCACCCTGTG
CCAATGTTGA GCCTTGGCAA TGCCTTTAAT GCCGATGATT TGGCCGCGTG GCGACGACGC
GCTGAACAAA TTATTGGTAC GCAGCCGATG AGCTATACCG TTGAGCCAAA AATTGATGGC
TTGGCCGTGG CATTAACCTA TATTAATGGG GTATTTAGCG TTGGCGCAAC CCGTGGCAAC
GGCGAAATTG GCGAGGATAT TACCGCCAAC CTACGCACAA TTCGCGATGT GCCCTTGCGG
CTGCAACCAA TCGACGGCCA AGCCTTGCCC GAACGCATCG AAGTGCGTGG CGAGGTCTAT
TTGCCTATCG AATCGTTTAA TCAATTGAAT GAACGCCAAG CCCATGCTGG CGAAAAAGTC
TTTGCCAATC CACGCAATGC TGCCGCTGGA TCGTTGCGTC AGCTCGATTC AACGATTACT
GCTAGCCGTC CGTTGCGCTT TTTTGCCTAC GCTGTCGGCC CTTTCAGCGG CGTTGAACTC
AAAAGCCAAG CCCAAACCCT TGATACCTTG CGCACTTATG GGTTTAGCGT TAATCCCGAT
ACGCGGCTTT TTGCTGATTT TGAGGCGGTA ATCGAATATT GCCACGAGTG GATGAGCCGC
CGTGAATCGC TAAGCTACGA AGTTGATGGC GTGGTAGTTA AAATTAATGA TTTTGCCATG
CAACGTGAAT TGGGCGTGGT TGGTCGTGAT CCACGCTGGG CGATTGCCTA TAAATTTCCA
GCTCGCGAAG AAACCACCAC CTTGCTCAAT ATTGTGATCA ATGTTGGTCG CACTGGTAAA
TTGATTCCCA ATGCTGTGCT CGAACCTGTC AGTTTGGGCG GCACGACGGT GCAGCATGCC
TCGTTGCACA ACGCCGATTA CATCATCAGC CGCGATATTC GCATTGGCGA TCGGGTTGTG
GTCAAACGGG CTGGCGATGT GATTCCCTAT GTGATTGGGC CAATCGTTGA GGCTCGCACT
GGCGACGAGC GAGTTTGGCC AGCGCCAACT CATTGTCCAA CTTGTGGTCA GCCAGTCGAG
CAAATTGGCG ATGAAGTTGA TATTTATTGC GTCAATAATA CTTGTCCTGC GCGTTTGATT
CGTTCAATCG AACATTGGGT CAGCCGTGGC GCGATGGATA TTGTGGGCAT GGGCGAGCGC
CAAGCCAGCC AATTTGTCGA AATGGGCTTG ATCAAATCGA TTCCTGATAT TTATCGTTTG
ACGGTTGATA GCTTTGGGGG GCGTGAAGGC TATGGCGAAC GGCGCGTCGC TAATTTGCTG
AATGCGATCG AAGAATCCAA GCGACGCCCG CTTGATCGTG TCATCACCGC TTTGGGGATT
AACGGAGTTG GAACGGTGGC GGCGGCGGAT TTAGCCCGCT ATTTCCGTTC ATTGCCAGCC
TTAGCCCAAG CCACGATTGA GCAATTGACC GCGATTGAGG GGATTGGTGG CAGCACCGCC
CAAAGCGTGG TCGATTTCTT CAATACGCCA GCCAACCAAC AATTAATCGC CGAATTATTG
GCTTTAGGCC TCAAAGCCGA GCCTAGCGAA GTTGCTGAAT TGCAGAGTGA TCGTTTGGCG
GGCAAAAGTT TTGTGATCAC TGGAACCTTG CCTGGCATTA GCCGCGAAGC CGCTCAAGCC
TTGATCGAAG CCCATGGCGG CAAGGTTGGC GGTAGCGTCA GCAAGAAAAC TGATTATTTG
CTGGCAGGCG AGGCAGCTGG CTCGAAATTG ACCAAAGCCC AAAGTTTAGG CGTAAAAGTG
CTGAGCATGG ATGAGTTGCA TGCGCTACTG GTCGATGAAT AG
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| Protein sequence | MAVSEQTVAR AASLRDELNL YNHHYYTLDA PLVSDAQYDS LLNELRAIEA EYPELRTPDS
PTQRVGSAPL SKFPKVQHPV PMLSLGNAFN ADDLAAWRRR AEQIIGTQPM SYTVEPKIDG
LAVALTYING VFSVGATRGN GEIGEDITAN LRTIRDVPLR LQPIDGQALP ERIEVRGEVY
LPIESFNQLN ERQAHAGEKV FANPRNAAAG SLRQLDSTIT ASRPLRFFAY AVGPFSGVEL
KSQAQTLDTL RTYGFSVNPD TRLFADFEAV IEYCHEWMSR RESLSYEVDG VVVKINDFAM
QRELGVVGRD PRWAIAYKFP AREETTTLLN IVINVGRTGK LIPNAVLEPV SLGGTTVQHA
SLHNADYIIS RDIRIGDRVV VKRAGDVIPY VIGPIVEART GDERVWPAPT HCPTCGQPVE
QIGDEVDIYC VNNTCPARLI RSIEHWVSRG AMDIVGMGER QASQFVEMGL IKSIPDIYRL
TVDSFGGREG YGERRVANLL NAIEESKRRP LDRVITALGI NGVGTVAAAD LARYFRSLPA
LAQATIEQLT AIEGIGGSTA QSVVDFFNTP ANQQLIAELL ALGLKAEPSE VAELQSDRLA
GKSFVITGTL PGISREAAQA LIEAHGGKVG GSVSKKTDYL LAGEAAGSKL TKAQSLGVKV
LSMDELHALL VDE
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