| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0787 |
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| Symbol | |
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| ID | 5732671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 886965 |
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| End bp | 889151 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641277917 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001543563 |
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| Protein GI | 159897316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000926536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGTT TACATAAGTT TTTGGCGCGG GCCGGCGTAG ATTCACGTCG GGCTTGCGAA
GAGTTGATGT TGGCTGGGCG CGTATCGGTT AATGGACGAG TTCAACGCGA ATTAGGAACC
CAGATCGACC CCGATAAAGA TGACATTCGA GTTGATGGCG AACAAATTAC ACCTCCAACC
GAGCTTCATT ACGTCTTATT GCACAAACCA AGCAGCGTCA TGACCACGTT GCATGACCCT
GAAGGCCGCC AAACCGTCGC CGATTTAGTC AAATCGCACA ATCGTTTATT TCCCGTAGGC
CGCCTCGATT ACGATAGCGA AGGGCTATTG TTGCTGACCG ATGATGGTGA TCTCACGTTC
CGTTTGACCC ACCCATCGTT CGAAGTCGAA AAAGAATATC AGGCCTTGTT AAACCAAACA
CCATCAGTTG AGCAATTGCG CGAGTGGCGC AATGGGGTTG AGCTTGACGA TGGCAAAACA
GCACCTGCAT GGATCGAATT GTTAAATGAA ACCGCCGATG GAACTTGGGT TCGGGTGGTT
ATTCACGAAG GTCGCAACCG CCAAATTCGG CGGGTTGCCG AAGCATTAGG CTTAGAAGTC
CGCCGCTTGA TCCGGTTGCG CGAAGGCCCA CTAACTTTAG GTGAATTACA AGCAGGCCAA
TGGCGAGCAT TAACACCCAC CGAAATTGAT CGTTTGCGTA TGCACGGCAA GCAAAGCAAA
GCATGGACAC CAGTACGCCC ACAAGAAAAC GCCGAGGGTG GCAAACCACG CCGTCAAGTT
CGGCGGATTG ATCGGTCTGG ACAGTTGGTA GAACGTCGGG CTGATGTTGA ACCGCGCTTA
CAACGAGCGC CTCACTTTAC TTCACAGGAA AATACAATGT CATTTGAAGA TTTCTCAATC
GAAGAAGAAC GCTCCACCGA TCGCCCACGC CGTCGCCCAG AACCTCGCCG CGAAGGTGGA
TTTAGCGACC GTGGCCCCCG CCGTGATGGC GGCAGCCCTA GCGACGACCG TGGCCCCCGC
CGCGAAGGTG GATTTAGCGA ACGCGGTCCG CGCCGTGAAG CTGGCGATTT TGGCGACCGT
GGTCCACGCC GCGAAGCTGG TTTCGGCGAA CGTGGTCCAC GCCGCGATGG CGGTGGCTTT
GGTGAACGCG GCCCGCGCCG CGATGGTGAC GGCCCGCGCC GCGATTTTGG CGACCGTGGC
CCACGTCGTG AAGGTGGCGA TTTTGGTGAC CGTGGCCCAC GTCGTGAAGG TGGTGGTTTC
GGCGAACGCG GTCCGCGCCG CGATGGTGAC GGCCCGCGCC GCGATTTTGG TGACCGTAGT
CCTCGTCGCG ATGGCGATTT TGGTGACCGT GGCTCACGTC GTGAAGGTGG CGATTTTGGT
GACCGTGGTC CACGCCGTGA AGGTGGCTTT GGCGAACGCG GCCCGCGCCG TGAAGGCGAC
GGCCCACGCC GCGATTTCGG TGACCGTGGC CCACGCCGTG AAGGTGGCGG TTTTGGCGAA
CGTGGTCCAC GCCGTGAAGG TGGCGGTTTT GGCGAACGCG GCCCACGCCG TGAAGGTGGC
GGTTTTGGCG AACGCAGTCC GCGCCGCGAT GGTGGCGGCT TTGGCGAACG CAGTCCGCGC
CGTGAAGGTG GCGGCTTTGG CGAACGCGGC CCGCGCCGTG AAGGTGGCGG TTTTGGTGAC
CGTGGTCCGC GCCGTGAAGG CGGCGGTTTC GGCGAACGTG GCCCACGCCG TGAAGGTGGC
GGTTTCGGCG AACGTGGCCC ACGTCGCGAT GCAAGTGGCT TCGATCGTAC CAATCGTCGC
GAAGAATTTT TTGATGATCG ACCACGTGGC GAACGTGGCT TGGCGCTTGA TCGCGCCCAT
CGTGGCGATG ATCGCCCTAA AAACACCTTT GGCGGTCGCC GCCCAAGCAA CCAAGGCTCG
TTTGATCGCC GTGGTTTTGA CAACCGTGGT CGCGACGACC GTCGTGGTTT CGATAACCGT
GGCCGCGATG ACCGTCGTGG TTTCGATGAT CGCGCATCAG CTCCACGCGA CAAAATGGTT
GAACGCGGGC CAATTTCAGC CCGCAATACG CCAGCGCCAA CGCCAGCACC TACGCCGGCC
CCAGTTGCCG AGCAAGCAGC TCAGCCAGCC CGTCGGATGC GCGTGGTACG GCGTTTGAAA
AAGGCAGGCG GTGATGAACA AGCTTAA
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| Protein sequence | MERLHKFLAR AGVDSRRACE ELMLAGRVSV NGRVQRELGT QIDPDKDDIR VDGEQITPPT
ELHYVLLHKP SSVMTTLHDP EGRQTVADLV KSHNRLFPVG RLDYDSEGLL LLTDDGDLTF
RLTHPSFEVE KEYQALLNQT PSVEQLREWR NGVELDDGKT APAWIELLNE TADGTWVRVV
IHEGRNRQIR RVAEALGLEV RRLIRLREGP LTLGELQAGQ WRALTPTEID RLRMHGKQSK
AWTPVRPQEN AEGGKPRRQV RRIDRSGQLV ERRADVEPRL QRAPHFTSQE NTMSFEDFSI
EEERSTDRPR RRPEPRREGG FSDRGPRRDG GSPSDDRGPR REGGFSERGP RREAGDFGDR
GPRREAGFGE RGPRRDGGGF GERGPRRDGD GPRRDFGDRG PRREGGDFGD RGPRREGGGF
GERGPRRDGD GPRRDFGDRS PRRDGDFGDR GSRREGGDFG DRGPRREGGF GERGPRREGD
GPRRDFGDRG PRREGGGFGE RGPRREGGGF GERGPRREGG GFGERSPRRD GGGFGERSPR
REGGGFGERG PRREGGGFGD RGPRREGGGF GERGPRREGG GFGERGPRRD ASGFDRTNRR
EEFFDDRPRG ERGLALDRAH RGDDRPKNTF GGRRPSNQGS FDRRGFDNRG RDDRRGFDNR
GRDDRRGFDD RASAPRDKMV ERGPISARNT PAPTPAPTPA PVAEQAAQPA RRMRVVRRLK
KAGGDEQA
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