Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0778 |
Symbol | |
ID | 5732662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 879297 |
End bp | 880229 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641277908 |
Product | LacI family transcription regulator |
Protein accession | YP_001543554 |
Protein GI | 159897307 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.551884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGA TCAAGGATGT TGCGCAATTA GCAGGGGTTT CAGTTGCCAC GGTGTCGTAT GTTTTGAACG ACAGCATGCC GGTCAGCGAA GCCACGCGCA ACAAAGTGCT AGCCGCAGTT GCCAAACTCG GCTATCAACC CCATCGTCAA GGCCGTAATC TGCAACGTCA ACGCACCTTA ACTATTGGCG TACTGTTACC CCAAGCTAAT CTATTATGTG AACTCGATTT GGCCACCTGG CTGCTCGAAG CAACCAATGC TGCAACTAGC GCAGGCTATA GTCTCTTACT ACAACCTGCC GATAGCCAAG CCCGTGGCGA TTTGGCCGAT GGTTGGATTA GTTTTGGCAC AGTACTCGAC CCACAATTGC CCCAAATTTG GGCATTAGCC CCCCCGTTTG AGCAACCAGC CGTCTTGTGT GACGCAGCCT TTGCTGCACA ACGCGCGGTT GAAACCTTGA CCCATGCGGG GATGCAACGG ATCGGCCTGA TTACGCTACC GCGCAGCATT CCAGGCTCGG CCCGTTGGTA TCTGGGTTAT CGACGCGCTT TACGCCGCGC AGGCATCGCC TTTGATCCAG CGTTGGTCGT CGAGCCAGCC GACAATCGTT TTCACGATGG GGTTGCTGCT TACGAAGCAC TTGCCGCCAG CGAAAACGAC TATGATGGCT TGATCGTCTG TGGCAATCAA CTGGCAACCG GGGTGGTGAT GGTCGATCAT GCCAAAGTAC CACTGATCGT TAGCCATAGC AATACCCAAC GCGGCATCTC GGGCTTTCGC TGGCCAACCG AACTTTGGGC ACATACCTTG GTGCGAAAAC TCCTACAACA GCTTGATGGG AGCGCCATTG CTCACCGTAC ATGGCTCAAC CCAAGCTTGG TGATTGGTTC ATTAGGTTTC AAGGAGGATC TCGATGGCTT CAATTACGTT TGA
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Protein sequence | MATIKDVAQL AGVSVATVSY VLNDSMPVSE ATRNKVLAAV AKLGYQPHRQ GRNLQRQRTL TIGVLLPQAN LLCELDLATW LLEATNAATS AGYSLLLQPA DSQARGDLAD GWISFGTVLD PQLPQIWALA PPFEQPAVLC DAAFAAQRAV ETLTHAGMQR IGLITLPRSI PGSARWYLGY RRALRRAGIA FDPALVVEPA DNRFHDGVAA YEALAASEND YDGLIVCGNQ LATGVVMVDH AKVPLIVSHS NTQRGISGFR WPTELWAHTL VRKLLQQLDG SAIAHRTWLN PSLVIGSLGF KEDLDGFNYV
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