Gene Haur_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0778 
Symbol 
ID5732662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp879297 
End bp880229 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID641277908 
ProductLacI family transcription regulator 
Protein accessionYP_001543554 
Protein GI159897307 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.551884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA TCAAGGATGT TGCGCAATTA GCAGGGGTTT CAGTTGCCAC GGTGTCGTAT 
GTTTTGAACG ACAGCATGCC GGTCAGCGAA GCCACGCGCA ACAAAGTGCT AGCCGCAGTT
GCCAAACTCG GCTATCAACC CCATCGTCAA GGCCGTAATC TGCAACGTCA ACGCACCTTA
ACTATTGGCG TACTGTTACC CCAAGCTAAT CTATTATGTG AACTCGATTT GGCCACCTGG
CTGCTCGAAG CAACCAATGC TGCAACTAGC GCAGGCTATA GTCTCTTACT ACAACCTGCC
GATAGCCAAG CCCGTGGCGA TTTGGCCGAT GGTTGGATTA GTTTTGGCAC AGTACTCGAC
CCACAATTGC CCCAAATTTG GGCATTAGCC CCCCCGTTTG AGCAACCAGC CGTCTTGTGT
GACGCAGCCT TTGCTGCACA ACGCGCGGTT GAAACCTTGA CCCATGCGGG GATGCAACGG
ATCGGCCTGA TTACGCTACC GCGCAGCATT CCAGGCTCGG CCCGTTGGTA TCTGGGTTAT
CGACGCGCTT TACGCCGCGC AGGCATCGCC TTTGATCCAG CGTTGGTCGT CGAGCCAGCC
GACAATCGTT TTCACGATGG GGTTGCTGCT TACGAAGCAC TTGCCGCCAG CGAAAACGAC
TATGATGGCT TGATCGTCTG TGGCAATCAA CTGGCAACCG GGGTGGTGAT GGTCGATCAT
GCCAAAGTAC CACTGATCGT TAGCCATAGC AATACCCAAC GCGGCATCTC GGGCTTTCGC
TGGCCAACCG AACTTTGGGC ACATACCTTG GTGCGAAAAC TCCTACAACA GCTTGATGGG
AGCGCCATTG CTCACCGTAC ATGGCTCAAC CCAAGCTTGG TGATTGGTTC ATTAGGTTTC
AAGGAGGATC TCGATGGCTT CAATTACGTT TGA
 
Protein sequence
MATIKDVAQL AGVSVATVSY VLNDSMPVSE ATRNKVLAAV AKLGYQPHRQ GRNLQRQRTL 
TIGVLLPQAN LLCELDLATW LLEATNAATS AGYSLLLQPA DSQARGDLAD GWISFGTVLD
PQLPQIWALA PPFEQPAVLC DAAFAAQRAV ETLTHAGMQR IGLITLPRSI PGSARWYLGY
RRALRRAGIA FDPALVVEPA DNRFHDGVAA YEALAASEND YDGLIVCGNQ LATGVVMVDH
AKVPLIVSHS NTQRGISGFR WPTELWAHTL VRKLLQQLDG SAIAHRTWLN PSLVIGSLGF
KEDLDGFNYV