| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0754 |
|---|
| Symbol | |
|---|
| ID | 5732477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 857035 |
|---|
| End bp | 857787 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641277884 |
|---|
| Product | Sec-independent protein translocase, TatC subunit |
|---|
| Protein accession | YP_001543530 |
|---|
| Protein GI | 159897283 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
|---|
| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0663389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT CAACAACCGC GATTGATGGC ACCATGACCT TGCTCGACCA CTTGCGCGAG
TTGCGTTCAC GGCTCACCAA GGTCTCGATT GCCGTATTAA TTGGCATGTT TGGTGGTTTT
TACATTGTCA ACAGCACTGG CTTTATTAAA TATGTGATTT TGAGCTTTGC TGGCGAGCAG
GGCGTGCAAA CAACCCAAGT TGCCGAAACG TTTACCACCT ACCTTAGTAC AGCGCTGACG
CTGGGCATTG CGGCAGCCAT GCCCGTGATT ATTTATCAAC TCTTGGCCTT TTTAGCGCCT
GGCCTGACCC GCACTGAACG CAAATGGATT TTTATCGGTT TGCCCATGGT GATTTTCTGC
TTTTTGGGTG GCTTAGCTTT TGGTTGGTTT GTAACAGCTC CAGCGGCAAT TAAATTTTTG
ATCAACTTTG GCATCGAGAA TGCTGGTAAT TTGATTGAAA ATAAGCCGCG CCTCGATGAT
TTTCTTTCGA TTCTCACCCG CCTGCTGCTG ATCAATGGCA TTGTCTTTGA ATTGCCGATG
ATCATGTTTA CCCTGACCAA ACTTGGCATT TTAAATCCAC GCAAGCTCGG GCGCTATCGC
CGCTATGTTG TGCTGATCAC GGTCGTCGCT GCGGCAATTC TGACCCCAAC TGGTGACCCT
GCCAACTTAG CTTTTTTGGC GGTTCCCATG TATCTCTTGT TTGAATTTGG CTTGTTGCTG
GGGCGTTTGG CTCAGCCCAA GCCCGCAAAT TAG
|
|---|
| Protein sequence | MAKSTTAIDG TMTLLDHLRE LRSRLTKVSI AVLIGMFGGF YIVNSTGFIK YVILSFAGEQ
GVQTTQVAET FTTYLSTALT LGIAAAMPVI IYQLLAFLAP GLTRTERKWI FIGLPMVIFC
FLGGLAFGWF VTAPAAIKFL INFGIENAGN LIENKPRLDD FLSILTRLLL INGIVFELPM
IMFTLTKLGI LNPRKLGRYR RYVVLITVVA AAILTPTGDP ANLAFLAVPM YLLFEFGLLL
GRLAQPKPAN
|
|---|
| |