Gene Haur_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0747 
Symbol 
ID5732470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp852151 
End bp852894 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content54% 
IMG OID641277877 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001543523 
Protein GI159897276 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0116786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA ACGATCAAGT GGCGATTGTC ACAGGTGGCA CTGGTGCGGT TGGGCGCGAA 
GTGGTTTCGG GGTTGATTCA ACGCGGCGCA CGGGTGGTTT TTTGCTATCG TCAGCGCGAT
GATTTGGCTG AAGAGATGTG CGATACGATT GCTGATGAGC AACGTTTGAT CGCCATTAAG
GCCGATGTGC GCGATGCTGA AGCCATGAAT AGCCTGGTTG AAGTGGCTGT GCGGCGCTGG
GAACGGCTCG ATATGCTGAT CACTGCCCAT TCTGCGGTTA ACAATGCTCC GGTGGCCGAC
ATGACCCTTG AGCAATGGAA CGATGTAATG GATGTGATGC TGCGCGGCGT GACACGGATT
ACCCGCGCAG TTTTGCGGCC AATGCAAAAA GCCCGTTATG GGCGAATTAT CACAATTACT
GGCTATCAGC CCTTAGCTGG TGGCCTAACC CAAGCCAACT ATGCTGCCGC ACTTGGTGGG
ATTATCGGCT TTTCTAAATC GTTGGCGCGT GAGGTTGCAC CATGGGGCAT TACGGTGAAT
AGCGTTGCCC CTGGGCTGAT CTCACGGCCC CATATGTCGA GTTTTGATCC AAGTTATATC
CCATGGGCCA CCAATATTGT GCCGTTGAAA CGCTTAGGCG CACCTGCCGA AATTACCCCA
GCAATTTTTA TGCTGGCCAA TCCAGAGGCG GGCTATATTA CGGGCCAAGT GCTGCCAGTC
GATGGCGGTT GGCGCATGGT TTAG
 
Protein sequence
MSINDQVAIV TGGTGAVGRE VVSGLIQRGA RVVFCYRQRD DLAEEMCDTI ADEQRLIAIK 
ADVRDAEAMN SLVEVAVRRW ERLDMLITAH SAVNNAPVAD MTLEQWNDVM DVMLRGVTRI
TRAVLRPMQK ARYGRIITIT GYQPLAGGLT QANYAAALGG IIGFSKSLAR EVAPWGITVN
SVAPGLISRP HMSSFDPSYI PWATNIVPLK RLGAPAEITP AIFMLANPEA GYITGQVLPV
DGGWRMV