Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0747 |
Symbol | |
ID | 5732470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 852151 |
End bp | 852894 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641277877 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001543523 |
Protein GI | 159897276 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0116786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA ACGATCAAGT GGCGATTGTC ACAGGTGGCA CTGGTGCGGT TGGGCGCGAA GTGGTTTCGG GGTTGATTCA ACGCGGCGCA CGGGTGGTTT TTTGCTATCG TCAGCGCGAT GATTTGGCTG AAGAGATGTG CGATACGATT GCTGATGAGC AACGTTTGAT CGCCATTAAG GCCGATGTGC GCGATGCTGA AGCCATGAAT AGCCTGGTTG AAGTGGCTGT GCGGCGCTGG GAACGGCTCG ATATGCTGAT CACTGCCCAT TCTGCGGTTA ACAATGCTCC GGTGGCCGAC ATGACCCTTG AGCAATGGAA CGATGTAATG GATGTGATGC TGCGCGGCGT GACACGGATT ACCCGCGCAG TTTTGCGGCC AATGCAAAAA GCCCGTTATG GGCGAATTAT CACAATTACT GGCTATCAGC CCTTAGCTGG TGGCCTAACC CAAGCCAACT ATGCTGCCGC ACTTGGTGGG ATTATCGGCT TTTCTAAATC GTTGGCGCGT GAGGTTGCAC CATGGGGCAT TACGGTGAAT AGCGTTGCCC CTGGGCTGAT CTCACGGCCC CATATGTCGA GTTTTGATCC AAGTTATATC CCATGGGCCA CCAATATTGT GCCGTTGAAA CGCTTAGGCG CACCTGCCGA AATTACCCCA GCAATTTTTA TGCTGGCCAA TCCAGAGGCG GGCTATATTA CGGGCCAAGT GCTGCCAGTC GATGGCGGTT GGCGCATGGT TTAG
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Protein sequence | MSINDQVAIV TGGTGAVGRE VVSGLIQRGA RVVFCYRQRD DLAEEMCDTI ADEQRLIAIK ADVRDAEAMN SLVEVAVRRW ERLDMLITAH SAVNNAPVAD MTLEQWNDVM DVMLRGVTRI TRAVLRPMQK ARYGRIITIT GYQPLAGGLT QANYAAALGG IIGFSKSLAR EVAPWGITVN SVAPGLISRP HMSSFDPSYI PWATNIVPLK RLGAPAEITP AIFMLANPEA GYITGQVLPV DGGWRMV
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