Gene Haur_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0729 
Symbol 
ID5732615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp838300 
End bp839394 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID641277859 
Productprotein serine/threonine phosphatase 
Protein accessionYP_001543505 
Protein GI159897258 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.950002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG CACAATCAGC AATCTATAGT TCACTGCTCA GTCACCGCGC CCAAGGTCGT 
GTGGCGGTTC TGCTTGAGCC ACCAGTACCA ACCCCGCCCG TAGCGCCTGA ACCCGACCAA
CGCCAAGCTG AACTGGAACA AGATTTGCAA TTGGCGCGAG ATTTGCAACA GGGCTTGATG
CTCGAAACCG TGCCGCGCCT GCCTGGCTGG GAAATGAGCG CGGTCTCATT GCCAGCGCGT
GAGCTTGGCG GCGACCTCTA TGATTTTTTG GCGGTCAACG GCTCGCAGGG AATTATGATT
GGCGATGTGA GCGGCAAGGG CTTACCTGCG GCGTTGCGGA TGGCGGTAGC ACGAACCGTG
TTTCGGGCTG AAGTCCGGCG CGGCCAATCG CCAGGCCAAA CCCTAGCGGC AGTCAATAAT
ATTTTGATCG AAGAAATGCC CCAAGGCATG GTTACGATGC TCTATGCCTT AATCGACCCG
CAAACGGGCA TGATGCACTT GGCGAATGCT GGTCACAATT ATCTGATTGT GATCAATAAT
CAAGTGATTG AAATCGAAAC GTCAGGTGTG CCACTTGGGG TTATGGAAAT TGATTGTTAT
AGTGAATCCA TCTTACAACT GAACTATGGC GATTCAGTCA TGTTGTACAC TGATGGTATT
GTTGAAGCGA CCAACGAACA CCAAGTATTG TATGGCTACC CGCGTTTTCA AAGCCTGTTA
CAAGCAGTTG GCCATCTCAA GCCTCGCGCC TTGATGGCCC GCGTGCTGAG CGAAGTTCGC
GCATGGACCC AAGGCCAGCT TAAACACGAT GATGTGACGA TGGTGCTAGT CCGGCGGCGC
TTGGCCAATT TGCTTGATGA AATGCATAGC ATTGTGGCCG ATGTGGTTGG GCCAATCACT
GCTGACGAGT GGTGGCAAGC CTTGAGCTTG GTTGGTACAA CCCGCACACC CGACCAATGT
TTAGAGTTAT TGCGCCCGCT GAATGAAATG GTATCCAGCC AATTTGGCCG TGGGATTGCC
CGCGAACTCC AAGCGCAATT GCGCCCAGTG ATCGAAGAAT ATCGCTTGCT CCAATCCACC
AAAGGATCGT CCTAA
 
Protein sequence
MQKAQSAIYS SLLSHRAQGR VAVLLEPPVP TPPVAPEPDQ RQAELEQDLQ LARDLQQGLM 
LETVPRLPGW EMSAVSLPAR ELGGDLYDFL AVNGSQGIMI GDVSGKGLPA ALRMAVARTV
FRAEVRRGQS PGQTLAAVNN ILIEEMPQGM VTMLYALIDP QTGMMHLANA GHNYLIVINN
QVIEIETSGV PLGVMEIDCY SESILQLNYG DSVMLYTDGI VEATNEHQVL YGYPRFQSLL
QAVGHLKPRA LMARVLSEVR AWTQGQLKHD DVTMVLVRRR LANLLDEMHS IVADVVGPIT
ADEWWQALSL VGTTRTPDQC LELLRPLNEM VSSQFGRGIA RELQAQLRPV IEEYRLLQST
KGSS