| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0724 |
|---|
| Symbol | |
|---|
| ID | 5732610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 831546 |
|---|
| End bp | 833045 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277854 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001543500 |
|---|
| Protein GI | 159897253 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATT TAGGTTCGCT TTTCTCGCTC GATTTTACGA ATTTGGCTGA TCGCCGCCGC
GTGATTATGC GGATTGTTGC CTTGGCTGCC TTGGTTGTGC CTTTTTTAGT GGTCTTGGTG
GCGTGGATTT ACGAACGCAA TAATCCGCAA TTGTGGGATG CGCTTGGGGT TTTGTTTGTC
TCGATGGGCG CGGTTTGGTT GATTGCCTTG TTCAGCTTGC GCATGATTAA TCAAGGCCAA
GATCAAATTG TTACCTATGT TTTAATTGGC ACAATTTCGT TGTCAGCCTT GGCTTGTGCC
GTGCGTTATG GCGGCATCGA TCAAAGCCTG ATTGTCTCGC TGTTGCTGGT GATGCTGTTT
ATTGTCGGTT TGGTCGCAAC ATGGCGCGAA ATTGTCTCGT ATGGCGTTAC GATTACTTTG
GCTTATGGCC TGTTATTACT GTTCAAGAGC AACCTTGAAT CATTTCAAGT GACAACCCTG
ACCGCTGCCA ATAACGCCGG GGTCTATGGG GTTGGTGCGG TGCTGTTTTT TGTTGGCTTG
GCTACCACGA TTGTGCTGAC CACGATTTTT AGCCGTGCTT TGGCTGAATA TTCGCAAAAA
AGCGAGCAAT GGACAGCCGA TTTGATGCGG GCCAATGAAC AATTGATCGA GAAAAATATT
CAGCAGATCG AGCTTGGCAC TGATCTTTCG TTTGCCGCCA CCGAGTTATC GGCAGCCTCG
CAGCAACAAG CTTCGGGGGC AACTGAGCAA GCCTCGGCTG TGGCAGAAGT TTCATCAACC
ATCGAAGAAT TGGGCTTTAC CGCGCGACAA ATTGCTAGCG CCTCGGATCA AGTCAGCATA
GCCGCCCAAC AAACCTTGAC CTCGTTGGCC ATGGGTCAGC AATCGGTTGA TGAAGCAATT
CAAGGCATGG AGCGGATCAA GCAGCGGGTG CAAGAGGTTT CTTCGCGGGT TTTGAGTTTG
GGCGAACGTT CGCATCATAT TAGCGAAATT ATTGCCTTGA TCGATGATGT TTCCGATGAA
ACCCACCTGC TGGCCTTGAA TGCGGCGATC GAAGCGGCTG GAGCTGGCGA GCATGGTCGG
CGATTTGCCG TGGTTGCCGC CGAAGTCAAG AGCTTGGCCA ATCGCACGTT GGCCGCCTCG
CGCGAAGTCA AAGATGTGAT TGCCGAAATT CAGGCTGCGA CCAACGCCTC AGTGCTAGCC
ACCGAAGAGA GCGTCAAAGA AGTCGAACAA GGGGTCAGTT TGGCCCATCG TGCTGGCCAA
GAGATGGATT CAATTGTGGT GTTGGGCGAA CATACCGCTC AATTAGCCCA AGAAATTAGC
CTAGCAACCG CTCAACAACA AACTGCATCG GAGCAAGTTG TTGAAACCAT GCGTGAAATT
GCCGAAGTCT CACGTCAAAC GGCGGCTGGT TCGCGCCAAA CTGCCGATGC CGCATCCAAA
CTCACCGCGA TTGCAAATCG CTTGCATTCG TTGGTCAACA TCGAGGCACA TACACGCTAA
|
|---|
| Protein sequence | MANLGSLFSL DFTNLADRRR VIMRIVALAA LVVPFLVVLV AWIYERNNPQ LWDALGVLFV
SMGAVWLIAL FSLRMINQGQ DQIVTYVLIG TISLSALACA VRYGGIDQSL IVSLLLVMLF
IVGLVATWRE IVSYGVTITL AYGLLLLFKS NLESFQVTTL TAANNAGVYG VGAVLFFVGL
ATTIVLTTIF SRALAEYSQK SEQWTADLMR ANEQLIEKNI QQIELGTDLS FAATELSAAS
QQQASGATEQ ASAVAEVSST IEELGFTARQ IASASDQVSI AAQQTLTSLA MGQQSVDEAI
QGMERIKQRV QEVSSRVLSL GERSHHISEI IALIDDVSDE THLLALNAAI EAAGAGEHGR
RFAVVAAEVK SLANRTLAAS REVKDVIAEI QAATNASVLA TEESVKEVEQ GVSLAHRAGQ
EMDSIVVLGE HTAQLAQEIS LATAQQQTAS EQVVETMREI AEVSRQTAAG SRQTADAASK
LTAIANRLHS LVNIEAHTR
|
|---|
| |