Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0720 |
Symbol | |
ID | 5732635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 829203 |
End bp | 829913 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641277850 |
Product | two component transcriptional regulator |
Protein accession | YP_001543496 |
Protein GI | 159897249 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCAC GATGGCGTAT TCTTGTAGTT GATGATGACA CGATTATTCG CCGCACGCTC GTGAGCAATT TGCTTAACGA TGGGTTTGAA GTAATGGCGG CAGAATCAGG CCAATCGGCC TTGACCATGG TCGAAAGTTC ATGGCCTGAT CTGGCGATTC TCGATTTGAT GATGCCTGGT ATGACTGGCT TTGAACTATC CGACCGTTTG CGGCGCTATG TGGAAATTCC GGTAATTATG CTGACCTCGA TTTCTGATGA GGCTACGACC GTGCGCGGCC TTGAGCAGCA TGCCGATGAT TATATGACTA AGCCCTATCG CTACCCTGAA TTGCGAGCGC GGGTCAACAA ACTGCTGACC AAATCGTATG AAGGTGGCTT GCATCCAGGC GAGTTGGTGG TGATTGACGA AGATCTTTCG GTCAATTTTG GTCAGCATAT TCTGTTGCGC AAGGGCGAGG CCATTCCGTT GGAGCCGATT GAGCTACGAG TGTTGTATTT GCTGCTCCAA ACGCCAACCG TGGCGGTGGC AACCACAACC CTGTTACGTA AAGCGTGGGG TTTGGGCGAA GAGGGCGATC AATCCTCGTT GTGGGTGCGA ATTCGCTCGT TGCGCACCAA ACTTGAGGAC AATCCATCGA AGCCGATCTA CTTAAAAACT GTGCGTGGCG TGGGCTACGT GTTTGACGTA CAACCACGGC GCGGCTTGTA A
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Protein sequence | MPARWRILVV DDDTIIRRTL VSNLLNDGFE VMAAESGQSA LTMVESSWPD LAILDLMMPG MTGFELSDRL RRYVEIPVIM LTSISDEATT VRGLEQHADD YMTKPYRYPE LRARVNKLLT KSYEGGLHPG ELVVIDEDLS VNFGQHILLR KGEAIPLEPI ELRVLYLLLQ TPTVAVATTT LLRKAWGLGE EGDQSSLWVR IRSLRTKLED NPSKPIYLKT VRGVGYVFDV QPRRGL
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