Gene Haur_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0720 
Symbol 
ID5732635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp829203 
End bp829913 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content52% 
IMG OID641277850 
Producttwo component transcriptional regulator 
Protein accessionYP_001543496 
Protein GI159897249 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCAC GATGGCGTAT TCTTGTAGTT GATGATGACA CGATTATTCG CCGCACGCTC 
GTGAGCAATT TGCTTAACGA TGGGTTTGAA GTAATGGCGG CAGAATCAGG CCAATCGGCC
TTGACCATGG TCGAAAGTTC ATGGCCTGAT CTGGCGATTC TCGATTTGAT GATGCCTGGT
ATGACTGGCT TTGAACTATC CGACCGTTTG CGGCGCTATG TGGAAATTCC GGTAATTATG
CTGACCTCGA TTTCTGATGA GGCTACGACC GTGCGCGGCC TTGAGCAGCA TGCCGATGAT
TATATGACTA AGCCCTATCG CTACCCTGAA TTGCGAGCGC GGGTCAACAA ACTGCTGACC
AAATCGTATG AAGGTGGCTT GCATCCAGGC GAGTTGGTGG TGATTGACGA AGATCTTTCG
GTCAATTTTG GTCAGCATAT TCTGTTGCGC AAGGGCGAGG CCATTCCGTT GGAGCCGATT
GAGCTACGAG TGTTGTATTT GCTGCTCCAA ACGCCAACCG TGGCGGTGGC AACCACAACC
CTGTTACGTA AAGCGTGGGG TTTGGGCGAA GAGGGCGATC AATCCTCGTT GTGGGTGCGA
ATTCGCTCGT TGCGCACCAA ACTTGAGGAC AATCCATCGA AGCCGATCTA CTTAAAAACT
GTGCGTGGCG TGGGCTACGT GTTTGACGTA CAACCACGGC GCGGCTTGTA A
 
Protein sequence
MPARWRILVV DDDTIIRRTL VSNLLNDGFE VMAAESGQSA LTMVESSWPD LAILDLMMPG 
MTGFELSDRL RRYVEIPVIM LTSISDEATT VRGLEQHADD YMTKPYRYPE LRARVNKLLT
KSYEGGLHPG ELVVIDEDLS VNFGQHILLR KGEAIPLEPI ELRVLYLLLQ TPTVAVATTT
LLRKAWGLGE EGDQSSLWVR IRSLRTKLED NPSKPIYLKT VRGVGYVFDV QPRRGL