Gene Haur_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0647 
Symbol 
ID5732547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp746724 
End bp747956 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content40% 
IMG OID641277776 
ProductNa-Ca exchanger/integrin-beta4 
Protein accessionYP_001543423 
Protein GI159897176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000312807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCTA TTCGCTATGC GATCATTCTG TTCGCCATCG TTATCTTATT GCCCCAAAAA 
ATGAGCGCAG CTGTTGCTGT TGATCCCCCG TATTACACAG GCACCTCGTA TAACGATAAT
TCACTGTCAC TTACCTACCA AGGTACATGG GAAAATGTAC TAAATACAGG AACCTATCCC
TATCTGGGTG GCTATCACAA AGGCACTGTT GGAAGTAGTG TTCAATTTGC ATTCAATGGC
AACACAATAA CGTATATGTA TGAAACTGGG CCAGCTTTTG GCAAGGCTGA AGTTTTTATC
GACAATAAGT TGGTTGAGAT TATTAATCAA AACTCGCTCT ATAGTAAGTC GCAAGTTAGC
CAATCATGGA CACTCTCAGC CGGTAATCAT ACAATCGATA TTAAATTAGC AAATGGAGCG
AGCGGATATT TCAATATCGA TGCTTTTATT GTTGATATCT TGCCCACAAA TATCGTTACA
CCATCGTGGC TCGATAACAC AACAACCATT CTGATGTATC AAGGTGCATT ATCAGGAATC
AATGGAGCAA CAGGGGCAAT CCAAAATACC TTACTAGAAA TGAGTTCTGG TCGAGGATGG
TGGGTAATTA CACCTGCTCA ATCATTCACC TATTACTACA CCCAATCACC AAACTACGAT
AAAGTTGTTA TTACCGTTGA TGGTGAAGAG ATTGGCATTA TTGATCAGGA AAGTCAGAAT
CAAGTACACC AGAAATGGAT TAATTTTGAT ATCGATGCCA ATGGCAAGAA ATTCCATACG
ATTCATGTGA TGACGATTCC AAATTCGAAT AACCAAATTC TCAATACCAC GAATCTTGAT
GCACTCACGT TCAATCCTGC ATTAGATACA GAAACAGCAC TCTCGATTGA ACAAAATACC
TATACGGTTC GCGAAGGAAA TACCTTACAA GTCAAAATTA AGCTATCAAC AGCCGTATCG
TATGATGTAT CGGTCGCATA TAAAACCACC TCGTTATCAG CCGTAGGCTG TAATATCAAT
CAATGCGATA GCATCGACGA CTATATCAAT ACCCAAGGGA GTGTTATTTT CTCGGCTGGA
CAAACGGAAA AGGTGGTTTC TATTCCGATA ACAACAGGGG ATGTGACTGA AGGGACAGAG
TTTTTTGCCC TAAATCTCTA TAGTCCTTCC AATGCAAGCA TCAATGAACA AAATCGATAT
ACCCGCATAA GTATTTTGAA TCGTCCATAT TAG
 
Protein sequence
MRSIRYAIIL FAIVILLPQK MSAAVAVDPP YYTGTSYNDN SLSLTYQGTW ENVLNTGTYP 
YLGGYHKGTV GSSVQFAFNG NTITYMYETG PAFGKAEVFI DNKLVEIINQ NSLYSKSQVS
QSWTLSAGNH TIDIKLANGA SGYFNIDAFI VDILPTNIVT PSWLDNTTTI LMYQGALSGI
NGATGAIQNT LLEMSSGRGW WVITPAQSFT YYYTQSPNYD KVVITVDGEE IGIIDQESQN
QVHQKWINFD IDANGKKFHT IHVMTIPNSN NQILNTTNLD ALTFNPALDT ETALSIEQNT
YTVREGNTLQ VKIKLSTAVS YDVSVAYKTT SLSAVGCNIN QCDSIDDYIN TQGSVIFSAG
QTEKVVSIPI TTGDVTEGTE FFALNLYSPS NASINEQNRY TRISILNRPY