| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0630 |
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| Symbol | |
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| ID | 5732528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 727128 |
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| End bp | 729176 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641277757 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001543406 |
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| Protein GI | 159897159 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATC CACGAATCTT GATTCTTGAT CATACGCCTA CAAGTACTCA AGACCTCAGC
ACTCAATTGA TGGCGGCTGG TTGCAGCGTT ATGGCCCATC TGAGCACATG GGAAGCCGCC
GCCTGCCTGC TTGGCGAGCA GAGTGTTGAT CTGGTCTTGG CAACGCTGCA TTTTGTGCCT
CAAATCAATC AGCAACCCTG CCCAGTTCCG GTGGTCTATC TGAGCCAAAC CAATGAGCAA
GCCACCCAAA TACCCAATCA ACCCACCGCG ATCGATATTT TAACCTTGCC AATTAGCACC
GAAAGCCTTG TGCTCACGCT TAAAACGATC ATCGAGCGCA GCAATTTGAC CCAGCGGCTT
AGCCGCGTTG AGGTGTGGAT GCAAACGATG TTGGCCAATG TCAGCGATGG CGTGGTGGCA
ATCGATCAGC ATGGCAAAAT TCAGTGGATT AATTCTGCCG CCGAGCACAT GACTGGCTGG
GATTATCGTA GTGCGCTCCA GCAGGATTTT AATCAAGTGG TGGTAATTCG CAGCAGTCTC
AACGATCAAC GCATCGATGT CATTGCGGCG GCCTTACGCA ACGAGCCAGT GTTTGCCTTG
CCCTTTGAGC GTTATTTGCA TGCTCGCGAT GGCCATGCAA CCTCAATTAC TGAACATGTT
ACGCCATTGC TCAATAACGA CGGCCAAAAT AATGGAGCAA TCGTGATTTT GCGCGATCAT
ACAGCCCAAT TACAAATGGA AGAGGCGCTG TATTATCAAT CGCTGCACGA TTCATTAACT
GGCTTGCCCA ATCGCCGTTC ATTTCAATTA CATTTATCAC GGGCTTTAGA ATACCAACGC
CATCATCATG ATTATAGCTT TGCGATCATT TTGCTCGATA TCGATGAATT TAAAATGGTT
AATGATGGCT TGGGTTATCA CATCGGCGAT ACGATGCTGA CCGAAATTGC CCAACGTTTA
CGTCGTGCCC TCTATTTACC AGGCGATGTG GTAGCACGCT TCGATGGCGA TGAATTTGCA
ATCTTTTTTG ATCGGCTGCC CGATTTGCCT GCGGCCTTCA ACGCCGCCCA ACGCATCCGC
CAACTCTTTG AAGATCCATT TATGATTGAA AATGGTCAGG AAATTTTCTG TAATGTCAGC
ATTGGCTTGG AATTAATCAC CAGCGAAGTG CCGATTGAAA CCGTGATGCG AAACGCTGAC
CTGGCACTGT ATCGGGCCAA ACATACAGGT CGCGGCGGCA TCGAAATTTT CGATCAAACC
TTGTATGCCA ATTTTAGCAC CCGTTTGCAC AACGAAACAG CGTTACGCCT AGCCTTGCAA
CGCCAAGAAT TTCGGTTGTT TGCCCAGCCA ATTATCGATT TTGAGCATAG CCATTGCACA
GGCTTTGAAA TTTTGATTCG TTGGGCACAC CCCGATGGGC GTTTGCGCTC GCCTGGCCAA
TTTTTGGATA TTGCCGAGGA AACTGGCTTA ATTATTCCAT TGGGCTGGTG GATGCTGGAA
GTTGCAGCCG AGCAGCTTGA GCGGTGGCAA GCAGACTCAA TGATGCAGCA TATGACCTTG
GCGATTAATC TCTCGCCGCG TCAATTATTG CATAGCCAGC TTTTGCCAAC GCTTAAATCA
ATATTCGAGC GCTATCAATT TCCACGTCAA CAATTGCATT TAGAAATTAC CGAAGGTGCA
TTATTAAATA CCGAACGAGC TGAACCAATT TTGAATGCCT TGCGTCATTT TGGCTTACAT
TTACATATTG ATGATTTTGG CACTGGCTAT TCGTCATTAA CCTATTTACA TCGTTTTCCG
TTGAATACAA TCAAAATTGA CCGTTCGTTT ATTCAAGCAG CGCTCGAAGA TCAACGGAGT
TTAGCGATTG TGCGCACAAT TATCAATTTG GCCCAAACCA TGCAATTGGC CACGATTGCC
GAGGGCATCG AAACCGCTGA GCATATTCAA GTGCTGCGTG AACTTGGCTG TCAAGCAGGC
CAAGGCTACT TCTTCTCGCC GCCCGTTCCA CTCGAACAGG CGGCGGACTT CGCATGTTCG
TTGAATTAG
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| Protein sequence | MSNPRILILD HTPTSTQDLS TQLMAAGCSV MAHLSTWEAA ACLLGEQSVD LVLATLHFVP
QINQQPCPVP VVYLSQTNEQ ATQIPNQPTA IDILTLPIST ESLVLTLKTI IERSNLTQRL
SRVEVWMQTM LANVSDGVVA IDQHGKIQWI NSAAEHMTGW DYRSALQQDF NQVVVIRSSL
NDQRIDVIAA ALRNEPVFAL PFERYLHARD GHATSITEHV TPLLNNDGQN NGAIVILRDH
TAQLQMEEAL YYQSLHDSLT GLPNRRSFQL HLSRALEYQR HHHDYSFAII LLDIDEFKMV
NDGLGYHIGD TMLTEIAQRL RRALYLPGDV VARFDGDEFA IFFDRLPDLP AAFNAAQRIR
QLFEDPFMIE NGQEIFCNVS IGLELITSEV PIETVMRNAD LALYRAKHTG RGGIEIFDQT
LYANFSTRLH NETALRLALQ RQEFRLFAQP IIDFEHSHCT GFEILIRWAH PDGRLRSPGQ
FLDIAEETGL IIPLGWWMLE VAAEQLERWQ ADSMMQHMTL AINLSPRQLL HSQLLPTLKS
IFERYQFPRQ QLHLEITEGA LLNTERAEPI LNALRHFGLH LHIDDFGTGY SSLTYLHRFP
LNTIKIDRSF IQAALEDQRS LAIVRTIINL AQTMQLATIA EGIETAEHIQ VLRELGCQAG
QGYFFSPPVP LEQAADFACS LN
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