| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0615 |
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| Symbol | |
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| ID | 5732513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 708205 |
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| End bp | 709476 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641277742 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001543391 |
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| Protein GI | 159897144 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.13964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATT TCGAATGGCC GCCAGAGCTT GACACCACGA TTGATGGTTT GGCCCAAGGC
GGCGATGGAG TTGGCCGCTA TGCTGGCCGA CCGGTGTTTG TGGCGGCGGC TTTGCCTGGC
GAACAGGTGA GGGTGCGCCT CACCGAGCGC CGTAATGGCT GGGCACGCGG GGTTTTACTG
GAGCCACCAA GCAATCCGGC AGCTGAACGG GTTACTCCGG CGTGTCCGGT TTATCAACGC
TGTGGTGGCT GCGATTGGCA ATATCAGATG ATTGAAAGCC AGCGCCAAGC CAAACAAACG
ATTTTGGCTG AGCAATTGCG CTTTGTGGCC CAAACCGATC ACGCCGAAGT TGCGGCCACG
GCGGCAGGCG AACCATGGCA TTATCGTTCG GTTGCGCGGG TGCATGTCGA TGGTCAACGA
GTGGGGTTTT ATGCCGCTGG TGGTCGCCAG ATTGTCGAAT TTGATCAGTG CTTGATCATT
GATCCGCGCT TGAATGCGAC GATTGAACGA TTAAAACCAC TGTTGCCTTT GATAGGCTTG
CGCGAAATTA GCCTGCGCCT GAGCACCACC GATGGCACAA TCCACGGTCA TTTGATTGGG
CAAGGCCAAA GTGCTTGGCG TAGTTGGGCA CGGCGTTGGA TGTCAGCAGA TGCCACGATT
GCTGGAGTTT CTTCGGCGAC CCGCGAGGGC TGGATGGCCT TGGCGGGAGC CGAATACTTG
TATGAGCAAT TGGGCGATGT ACGTTTGCGA ATTGCCCCAA CCAGCTTTTT TCAAGCTAAT
GTTGAGCGAG CGCGGGCAGT GTTGCAGCAA ATCGAGTGCT TCTTGCCGTT GAATAACACC
ACCCGTTTAC TTGATGGCTT TTGTGGCGTT GGTACGTTTT TGTTGCCTTT GGCACATAAC
ATTGGCCATG GCTGGGGCAT TGAGGAACAT CCGGCGGCAA TTCGCGATGC TCAGGCGAGT
GCTAAAGCCA ATCAACTTAG TAATGTGACC CTGAAAACCG GCAAGGTTGA GGCGATTTTG
CCGCAGCTCA AGCAACAATT TGATTTAGCG ATTGTTGATC CGCCACGGCG TGGAGTCGAG
CCAGCTGCCC TCAATGCCCT GATTGCTGCC CAACCAACTA TGATTGCCTA TGTGTCCTGT
CATCCTGGCA CCTTGGCTCG CGATATTAAG CTTTTGCAGG CTGGCGGTTA TACCATTCAG
CATGCTCAGC CCCACGATTT CTTTCCGCAA ACCAGCCATG TTGAGAGTTT GGTTTTGCTC
AGTAAGGCTT GA
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| Protein sequence | MSDFEWPPEL DTTIDGLAQG GDGVGRYAGR PVFVAAALPG EQVRVRLTER RNGWARGVLL
EPPSNPAAER VTPACPVYQR CGGCDWQYQM IESQRQAKQT ILAEQLRFVA QTDHAEVAAT
AAGEPWHYRS VARVHVDGQR VGFYAAGGRQ IVEFDQCLII DPRLNATIER LKPLLPLIGL
REISLRLSTT DGTIHGHLIG QGQSAWRSWA RRWMSADATI AGVSSATREG WMALAGAEYL
YEQLGDVRLR IAPTSFFQAN VERARAVLQQ IECFLPLNNT TRLLDGFCGV GTFLLPLAHN
IGHGWGIEEH PAAIRDAQAS AKANQLSNVT LKTGKVEAIL PQLKQQFDLA IVDPPRRGVE
PAALNALIAA QPTMIAYVSC HPGTLARDIK LLQAGGYTIQ HAQPHDFFPQ TSHVESLVLL
SKA
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