Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0602 |
Symbol | |
ID | 5732500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 691823 |
End bp | 693577 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641277729 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001543378 |
Protein GI | 159897131 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.416305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTATCT CCGTCCCACG CATTACACCA CGACTATTAA TGTCCGGTGA TCCATTATTT AGCTTGGTGC GGTTGATTAG CCTTGGCTTG ATTTTGGTCG TCGGCGCTCG CATCGATCAA CACACGGTTA TTCCGCCAAC CACCCCATTT GGCCTAATTT GGTGGGCCTA TGCGATCTAT GGTTTAGTGA TGGCTGGCTC GGCTTTTGTG CCCCGCTTTC GCAACTTGCC CTCGTGGATC TTTATTGTTG ATTTTGGCTT TATTGCGCTC TTTGCCTTGT TTAGCGGTCT GCCCCCCGCC TTGTTGGTAG CGTTGATTAT GTTGCCAACT GTGTGGGCTT CAACCAATCG TTCGCCTGCC CAAGCAGTTG GTACGGGTGT GGGCGCAGCG ATTGTCTATG CTGGCATTAC GCTATATCGG CGCTTTGGCG ATGCTGGCAA TGTTGGCAGC GAAGAGATGT TTGTTAGCAT TGCAGTCAAC TGTACAGCTT TGATTTTAGT TTCGTGGTTG GTCAGCACGC TTTCTGGTCA GTCCAGCGAG ATCAATCGCG AACATGTGAT TGCCGCACGG CGTGATGTCG ATAGTGCTCA GCGTGATGCC GAAGCGTATC GCGACCGCAT GCGAGCACTC TACGAAGTTG CCTATAAACT TAGTACTACC ATGAATTTTC AAACGGTGCT TGATGCCACC GTGACCGAAT CGATTCGTTT GATCAATGGC CGCAGTAGCG TGGTGCTGTT ACCAACTGGC GAGCCAGATG AATTGTATGT TGCTGCTGGC GTTGGAGTTG GCTCTGGTGA TCTCAATTTG CGGATTGCGA TTGAGCCAAC TGGAATTATG GCCTCGATTC TGGCCTCAGG CACGCCGCGC ATTTTGAACG ATTTGCGCCA ATCACATGCC TTGAGCAGCG TACCATCGAT GCAAAACTGT GCGTGTGTTT GTTGTGTGCC GCTGAGCGCA GGCCGCCGCA ACTATGGCAT CGTGGTCGTC GGGGTTGATC GTAACGAAAT CAATGAAGAT GAATTGGGTA TGGTTTCGGC CTTGGCCAAT TACGCAATTA TTGCCATGCT CAATGCCCAA TTGGTTGGCG AATTACGCGA TGAACGCACC AAACTGATTA GCAAAGAAGA AGAAGTGCGC CAACAACTTG CCCGCGATTT GCACGATGGC CCCGCTCAAT CAGTGGCCGC CATCACCATG AATATTGAAT TTGTCAAGCG TTTATTGGAG CGCGAACCAA GCCGCGTGAT GCAAGAGCTG ACCAAAATGG GCGAATTAGC CCGCCGCACC ACCTATGATA TTCGCACGCT TTTGTTCGAG TTGCGCCCCT TGACTCTGGA TAGCCAAGGC CTCGTTGCGA CCCTGCGCGA ATATGTAACC CGCTTCAAAG ATGGCACGAC CCAGGTAATC CTCGAAGAAA CCGTCGGCGA GTTGCGGCTT GATGCCAAAC GTGAAGGCAC CTTGTTCAAT ATTATTCAAG AAGCTAGCAA CAATGCCATG AAACATGCCC AAGCCAAACA CATCTGGATT CGGCTAACCC GCCAAGGCGA TGAGTTGATG GCGACAGTGC AGGATGATGG CAAAGGCTTC GATTTGCAAG CAGTTCGGGC TAACTACAGC AAACGTGGCT CGTTTGGCCT CTTAAATATT GATGAACGGG CACGCATGGT TGGCGGGAGT GCCGAAATGA CCTCAGCAGT TGGCGCTGGT ACAACCGTTC GGGTTATTGT ACCGCTTGAT GCCAGTAGTA TTTAG
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Protein sequence | MSISVPRITP RLLMSGDPLF SLVRLISLGL ILVVGARIDQ HTVIPPTTPF GLIWWAYAIY GLVMAGSAFV PRFRNLPSWI FIVDFGFIAL FALFSGLPPA LLVALIMLPT VWASTNRSPA QAVGTGVGAA IVYAGITLYR RFGDAGNVGS EEMFVSIAVN CTALILVSWL VSTLSGQSSE INREHVIAAR RDVDSAQRDA EAYRDRMRAL YEVAYKLSTT MNFQTVLDAT VTESIRLING RSSVVLLPTG EPDELYVAAG VGVGSGDLNL RIAIEPTGIM ASILASGTPR ILNDLRQSHA LSSVPSMQNC ACVCCVPLSA GRRNYGIVVV GVDRNEINED ELGMVSALAN YAIIAMLNAQ LVGELRDERT KLISKEEEVR QQLARDLHDG PAQSVAAITM NIEFVKRLLE REPSRVMQEL TKMGELARRT TYDIRTLLFE LRPLTLDSQG LVATLREYVT RFKDGTTQVI LEETVGELRL DAKREGTLFN IIQEASNNAM KHAQAKHIWI RLTRQGDELM ATVQDDGKGF DLQAVRANYS KRGSFGLLNI DERARMVGGS AEMTSAVGAG TTVRVIVPLD ASSI
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