Gene Haur_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0574 
Symbol 
ID5732295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp661191 
End bp662186 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content48% 
IMG OID641277701 
ProductCRISPR-associated RAMP Cmr6 family protein 
Protein accessionYP_001543350 
Protein GI159897103 
COG category[L] Replication, recombination and repair 
COG ID[COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01898] CRISPR-associated RAMP protein, Cmr6 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAGAA CAGCACTAGC CCAGATCAAA CCTGCCCCAA ATACCCACGC GGGCTTATGG 
CTCAATCGAT TTTTAACCGA AGGCAGCGCT GATGATGAGA GCAAAGCCAA AGCTAGCTTG 
GTTGAACAAG TGGCAGGCCT ACAAATACCA GCCCTGTATA CACATTTTTA TAATCGTTGG 
GCAGCGAACC TTGAGCAGGC TGGAGCAACT TTTCGCAAGG CCGAAGTTCA AGGGCGCATG 
ATTGTCGGTT TAGGTAATAC CAGCCCAATC GAAACCTCGA TTTGCTTGCA TCATACCTAT 
GGTGTGCCCT ATATTCCAGG CAGCGCGATC AAAGGCTTGG TAGCTGCCTA TGCACGGCAA 
CAGCTTGGCG ACGATTGGAC TAAAGGTTCA GAAACCCAAG CTGAAAAGCC GTTGAATGCC 
TACCAAACGA TGTTTGGGCA TCCTGAAAGC GCTGGCTATC TGACCTTCTT TGATGCCTTG 
TATATTCCCA ATAGCAGCCA ACCGCTCGCG ATTGATGTGA TGACTCCGCA TCATATGACC 
TATCAGCAAG GCAATTTACA AGCGCCCACC GACTTCGATT CGCCCAATCC GGTGGCCTTC 
CTGAGTGCAA CAGGCAGCTA TTTATTTGCC ATCGGTGGCG ATCAAGCGTG GGTCACAGCA 
GCGTTTGCAA TTCTGGAAAA AGCCTTGCTG GAATATGGTG TTGGAGCTAA AACCTCTAGT 
GGTTATGGTC GATTGAAGTT GGCCTCACCA CCACGCGACC CCAAACAAGA TGCCTTAGAG 
CAATTTTTGG CTGATTTTAA CCGTTTGCGT CCCAATCAAT TTGTCAGCCA AATTAGCCGC 
TATATTCAAC AATGGGAAGA ATTACAAGGT ATTCCCCAGA AACTTGAGGC TGCCGAAACC 
ATCATTAAAA TGGCACGGGT TGTCATGCGC GAAAAGGATC TACTGACCAA ACAATGGTTT 
ACCAAAGTAA GCGAATTTAT TGAGCAACAT TCCTAG
 
Protein sequence
MRRTALAQIK PAPNTHAGLW LNRFLTEGSA DDESKAKASL VEQVAGLQIP ALYTHFYNRW 
AANLEQAGAT FRKAEVQGRM IVGLGNTSPI ETSICLHHTY GVPYIPGSAI KGLVAAYARQ 
QLGDDWTKGS ETQAEKPLNA YQTMFGHPES AGYLTFFDAL YIPNSSQPLA IDVMTPHHMT 
YQQGNLQAPT DFDSPNPVAF LSATGSYLFA IGGDQAWVTA AFAILEKALL EYGVGAKTSS 
GYGRLKLASP PRDPKQDALE QFLADFNRLR PNQFVSQISR YIQQWEELQG IPQKLEAAET 
IIKMARVVMR EKDLLTKQWF TKVSEFIEQH S