Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0565 |
Symbol | |
ID | 5732286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 655341 |
End bp | 656042 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641277692 |
Product | terminase small subunit |
Protein accession | YP_001543341 |
Protein GI | 159897094 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3728] Phage terminase, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATC CCGAAGCAGA AAAACCATTG ACCACGCGAC AACGGCGCTT TGTCGATGAA TATCTCGTGG ATTTCAATGC CACGAAAGCG GCAATTCGGG CTGGGTATGC GGAACGCTCA GCGCGGAGCA TCGGATCAGA AAACCTGACA AAACCTAACA TTAAGGCCGA GATTGCACGC CGCGCCGACG ACATTATTAG TAAGACCGAG ATTGTGGGAC GGCTCGCACA GCAGGCTCGC ACCTCGATGG ATGATTTCTT TTTTATTGGC GAAGAAGAGC GAACAGTCAT CAAACGGCGC ATTTTAGTCA GTGTTGATAA GAAAGGTAGC TCAAAAGAGA TTGTTTTAGA GGAGGTTGAA GAAAAGGCCA TGCGTCCGGC GACCTATCTC AGCTTAGTCA AAGCCGAGCA CCGTGGCGTG ATGCACCTTA TCAAAAAATA CTCGGTCGGC CCTAAGGGGG AATCGATTGA ATTGTACGAC GCACAAGGTG CGTTGATCAC ACTAGGCAAG TATCACGCAA TGTGGGTTGA TCGCGCTGAG CATACGGGTA GGGGCGGTGC GCCAATTCCG ATTGATAGTC CGGCGATGGC GCAAGCAGCT GATGAATTAA AACAGTGGCG TGAGGAACAA TGTCGAAAGC TGTCGAATTG GCAAAGTGCC ATGCCGACCC TGCCTACTTC ACCCACAACT ACGGACGAAT AG
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Protein sequence | MTNPEAEKPL TTRQRRFVDE YLVDFNATKA AIRAGYAERS ARSIGSENLT KPNIKAEIAR RADDIISKTE IVGRLAQQAR TSMDDFFFIG EEERTVIKRR ILVSVDKKGS SKEIVLEEVE EKAMRPATYL SLVKAEHRGV MHLIKKYSVG PKGESIELYD AQGALITLGK YHAMWVDRAE HTGRGGAPIP IDSPAMAQAA DELKQWREEQ CRKLSNWQSA MPTLPTSPTT TDE
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