Gene Haur_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0565 
Symbol 
ID5732286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp655341 
End bp656042 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID641277692 
Productterminase small subunit 
Protein accessionYP_001543341 
Protein GI159897094 
COG category[L] Replication, recombination and repair 
COG ID[COG3728] Phage terminase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATC CCGAAGCAGA AAAACCATTG ACCACGCGAC AACGGCGCTT TGTCGATGAA 
TATCTCGTGG ATTTCAATGC CACGAAAGCG GCAATTCGGG CTGGGTATGC GGAACGCTCA
GCGCGGAGCA TCGGATCAGA AAACCTGACA AAACCTAACA TTAAGGCCGA GATTGCACGC
CGCGCCGACG ACATTATTAG TAAGACCGAG ATTGTGGGAC GGCTCGCACA GCAGGCTCGC
ACCTCGATGG ATGATTTCTT TTTTATTGGC GAAGAAGAGC GAACAGTCAT CAAACGGCGC
ATTTTAGTCA GTGTTGATAA GAAAGGTAGC TCAAAAGAGA TTGTTTTAGA GGAGGTTGAA
GAAAAGGCCA TGCGTCCGGC GACCTATCTC AGCTTAGTCA AAGCCGAGCA CCGTGGCGTG
ATGCACCTTA TCAAAAAATA CTCGGTCGGC CCTAAGGGGG AATCGATTGA ATTGTACGAC
GCACAAGGTG CGTTGATCAC ACTAGGCAAG TATCACGCAA TGTGGGTTGA TCGCGCTGAG
CATACGGGTA GGGGCGGTGC GCCAATTCCG ATTGATAGTC CGGCGATGGC GCAAGCAGCT
GATGAATTAA AACAGTGGCG TGAGGAACAA TGTCGAAAGC TGTCGAATTG GCAAAGTGCC
ATGCCGACCC TGCCTACTTC ACCCACAACT ACGGACGAAT AG
 
Protein sequence
MTNPEAEKPL TTRQRRFVDE YLVDFNATKA AIRAGYAERS ARSIGSENLT KPNIKAEIAR 
RADDIISKTE IVGRLAQQAR TSMDDFFFIG EEERTVIKRR ILVSVDKKGS SKEIVLEEVE
EKAMRPATYL SLVKAEHRGV MHLIKKYSVG PKGESIELYD AQGALITLGK YHAMWVDRAE
HTGRGGAPIP IDSPAMAQAA DELKQWREEQ CRKLSNWQSA MPTLPTSPTT TDE