| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0502 |
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| Symbol | |
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| ID | 5732416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 583543 |
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| End bp | 584790 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277628 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001543281 |
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| Protein GI | 159897034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGC AAACACAACC GGGCATGGAT CAATCTGATG TGCTTCCCAG CACAGGATTG
AACGCGACCC CACAGGCCGA TTATTCTGGC GATGATGATC GTGCCCTGCT GGAGGAGTAT
CTCCGTGATC CAGCCCACGA TTATCGCAAT CTCAAGTATG GTGATTCGGT CGATGGCACG
ATTGTTCGCG TTGATCGCGA CGAGGTGTTG GTCGATATTG GCTCCAAGTC GGAAGGCGTG
GTGCCAGGCC GCGAGATGAC CAGTCTGTCG TCGGAAGAAC GCGCCGAACT CAAGGTTGGC
GATGTCTTGC TTGTTACAGT CGTTCAAACC GAAGACGCTG AAGGGCGTAT CGTGTTGTCG
ATAGATAAAG CACGCCAAGA AAAGAGTTGG CGAGCCTTGC AAGTCAACCA TGAGGCTGGC
GATGTGATTC ACGCCGCCGT GACCAACTAT AACAAGGGTG GTCTGTTGGT TAATTTAAGT
GGGGTGCGTG GCTTTGTGCC ATCATCACAG GTCAGCAGCG TCAGCCGTGG CTCCGATGTC
CAAAAACAAT CGGATATGGC AAAACTGGTC GGCCAAACCT TGCCACTGAA AATTATCGAA
ATCAATCGTT CGCGCAATCG GCTGATTCTA TCCGAGCGCC AAGCCGTCCA AGAGGTTCGC
GATTCGCGCA AGGATCAACT GCTTGAAAAA CTGGAACCAG GCGCAGTTCG CACTGGCCGC
GTAACCAGTT TGTGCGATTT CGGCGCGTTT GTCGATATTG GCGGAGCAGA CGGTTTGGTT
CACCTTTCCG AGCTTTCTTG GAGCCGCGTC AAACATCCCG AGGAAGTGCT GAAAGTTGGC
GATGCAGTCA GCGTCTATAT TTTAAGCGTC GATGAAGATA AAAAACGCAT CGCGCTGAGT
ATCAAGCGCA CCCAAGCTGA GCCTTGGACA ACCGTTACCG ACCGCTACCA AATTGGCCAA
AGCGTTTCAG GGGTTGTTAC TCAATTGACC GCCTTTGGCG CGTTTGTCCG GCTTGAAGAT
GGCATCGAAG GTCTGATCCA CATCTCAGAA ATGAGTGATG AACGGATTCA GCACCCACGC
GATGTGATTA ATGAAGGCGA TAGCGTTTCA GCCCGCATTA TTCGGATCGA CCCAACGCGC
AAGCGGATTG GCTTGAGTAC CCGCAGTGGC AGCGCTGAAG CAACCGCTGA AGCAACTGCT
GAAACAGCAA CCGAAGAACC AAGCGCTGCA GCCGAAGACG AAGAATAA
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| Protein sequence | MDEQTQPGMD QSDVLPSTGL NATPQADYSG DDDRALLEEY LRDPAHDYRN LKYGDSVDGT
IVRVDRDEVL VDIGSKSEGV VPGREMTSLS SEERAELKVG DVLLVTVVQT EDAEGRIVLS
IDKARQEKSW RALQVNHEAG DVIHAAVTNY NKGGLLVNLS GVRGFVPSSQ VSSVSRGSDV
QKQSDMAKLV GQTLPLKIIE INRSRNRLIL SERQAVQEVR DSRKDQLLEK LEPGAVRTGR
VTSLCDFGAF VDIGGADGLV HLSELSWSRV KHPEEVLKVG DAVSVYILSV DEDKKRIALS
IKRTQAEPWT TVTDRYQIGQ SVSGVVTQLT AFGAFVRLED GIEGLIHISE MSDERIQHPR
DVINEGDSVS ARIIRIDPTR KRIGLSTRSG SAEATAEATA ETATEEPSAA AEDEE
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