Gene Haur_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0490 
Symbol 
ID5732404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp571828 
End bp572697 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID641277616 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001543269 
Protein GI159897022 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000477991 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTG TAACCCTCAA AACTGCGGTT GGGCCACGTC CAGGCATTGT GCTTGGCGAT 
CGGGTGATGT TGCTCGATGG CTATCAATCG CTCCAAGCCT TAATCGAAGC AGGCGATGCT
GGCTTGGACA CAATCAAGGC GGCCTTGCCC GACTATCAAA GCCGTGCAGG CATCCAATTA
AATATGGATC AATTGTTGGC TCCCTTGCCC CGCCCATTGA AAAATGTGTT TTGTGTGGGC
CTTAATTATG CAGCCCACGC TCGTGAATCG TTGCAAGCCA AAGGGCTAGA AGTCAAAATG
CCCGAGCATC CGGTATTTTT CACCAAACCA CCAACCGCCA TCAACAGCCC AACTGGCGAA
ATTGTGATTG ATCCAGCAGT TTCCGAACGG ATTGATTGGG AAGTTGAATT GGGTGTGGTG
ATCGGCAAAG CTGGCAAAAA CATCAGCCAC GAGCAAGCCA TGGAGCATGT TTGGGGCTAT
ACGGTGATTA ACGATGTTTC GGCGCGAGAT TTACAAATGC GCCATCAGCA ATTTTTCAAA
GGCAAAGCGC TCGATGGCTC ATGCCCAATG GGGCCGTGGA TCATCACCAG CGATGAGTTG
ACCGACCCGC ATAATTTGGT GGTTCGGCTA CGCGTCAACG GCGAGATCAA ACAGGAGTCT
AATACCAACG ATCTTATTTT TAATATTCCT ACATTAATTC ATGTGCTTTC CCAAGGCATG
ACCCTTGAGC CAGGCGATAT TATTGCAACT GGCACACCGG CTGGCGTAGG TTTTGCGCGT
ACTCCCCAAG AATTTTTACG CCCAGGCGAT TTGCTCGAAA CCGAAGTTGA GGGCATTGGT
ATTCTTCGTA ACCCTGTCGT GGCAGGCTAA
 
Protein sequence
MRFVTLKTAV GPRPGIVLGD RVMLLDGYQS LQALIEAGDA GLDTIKAALP DYQSRAGIQL 
NMDQLLAPLP RPLKNVFCVG LNYAAHARES LQAKGLEVKM PEHPVFFTKP PTAINSPTGE
IVIDPAVSER IDWEVELGVV IGKAGKNISH EQAMEHVWGY TVINDVSARD LQMRHQQFFK
GKALDGSCPM GPWIITSDEL TDPHNLVVRL RVNGEIKQES NTNDLIFNIP TLIHVLSQGM
TLEPGDIIAT GTPAGVGFAR TPQEFLRPGD LLETEVEGIG ILRNPVVAG