Gene Haur_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0488 
Symbol 
ID5732387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp568414 
End bp568863 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID641277614 
Productribose-5-phosphate isomerase B 
Protein accessionYP_001543267 
Protein GI159897020 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.136003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGA AAATTGCGGT CGGAACCGAT CATGGTGGTT TGATTTTGAA GCAAGCAGTA 
ATTGAAGAAG TGCAACGGCT GGGCCATGAA GTGCTCGATT TTGGCACCGA TTCGCCTGCT 
TCGGTCGATT ATCCCGATTT TGCTGCGGCT GTGGGTAATG CTGTAGTAAG TGGCCAAGCT 
GAACGTGGCA TTGCGATTTG CGGTAGTGGC GTTGGCGTGA CGGTCGCCGC CAATAAAATT 
AAAGGGGTGC GAGCCTGTTT GTGCCACGAC ACCTATTCGG CGCATCAAGG GGTTGAGCAC 
GACGATCTGA ATGTATTGTG TTTGGGCGGG CGGGTGATTG GCCCAGCCTT GGCTGGCGAA 
ATTGTCCAAG CATTTTTGAG CGCAACGTTT CACAATGAAG CTCGCTTTAC TCGGCGCTTG 
GATAAAGTGA TTGCCTTAGA AAACCAATAA
 
Protein sequence
MIMKIAVGTD HGGLILKQAV IEEVQRLGHE VLDFGTDSPA SVDYPDFAAA VGNAVVSGQA 
ERGIAICGSG VGVTVAANKI KGVRACLCHD TYSAHQGVEH DDLNVLCLGG RVIGPALAGE 
IVQAFLSATF HNEARFTRRL DKVIALENQ